Protein Alignment Ubx and nkx2-1

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: XP_002935383.1
• Gene: nkx2-1 / 100135015
• XenbaseID: XB-GENE-485985
• Length: 346
• Species: Xenopus tropicalis
• Alignment Length: 279
• Identity: 64/279 - (22%)
• Similarity: 107/279 - (38%)
• Gaps: 68/279 - (24%)

  Fly   151 MPVRPSACTPDS-------------RVGGYLDTSG-GSPVS--HRGGSAGGNVSVSGGNGNAGGV 199
            |.:.|...||.|             :|.  ::::| |:|:|  :|............|.|:.|.|
 Frog     1 MSMSPKHTTPFSVSDILSPLEESYKKVA--MESAGLGAPLSAAYRQSQVSQASMQQHGMGHNGPV 63

  Fly   200 QSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKSKIR-SDLT 263
            .:...:..||....::.|:.|     ....:|....|.:..|           |.:..:| |..|
 Frog    64 SAAYHMTAAGVPQLSHTTMGG-----YCNGNLGNLGNMSELP-----------PYQDTMRNSSAT 112

  Fly   264 QYGGISTD---------MGKRYSESLAGSLLPDWLGTNGL---------------RRRGRQTYTR 304
            .:.|.:.|         ||.....::.|      ||..|.               ||:.|..:::
 Frog   113 GWYGANPDPRFSTISRFMGPSSGMNMGG------LGNMGSLGDVGKSMTPLQATPRRKRRVLFSQ 171

  Fly   305 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQ---AIKELNEQEKQ 366
            .|..|||:.|....||:...|..:|..:.||..|:||||||.|.|:|::.:   |.:::.:....
 Frog   172 AQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQQMQQDNSS 236

  Fly   367 AQAQKAAAAAAAAAAVQGG 385
            .|.|::....|....|:.|
 Frog   237 CQQQQSPRRVAVPVLVKDG 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	22/55 (40%)
nkx2-1	XP_002935383.1	Homeodomain	163..219	CDD:459649	22/55 (40%)