Protein Alignment Ubx and hoxb6

DIOPT Version :10

• Sequence 1: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Sequence 2: XP_002938066.1
• Gene: hoxb6 / 100124320
• XenbaseID: XB-GENE-1006005
• Length: 223
• Species: Xenopus tropicalis
• Alignment Length: 266
• Identity: 87/266 - (32%)
• Similarity: 107/266 - (40%)
• Gaps: 104/266 - (39%)

  Fly   143 GQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAGGVQS------ 201
            ||....|.:|:..|         ||.|     |:.|...|.|           |.|||.
 Frog    17 GQEPFLGQIPLYSS---------GYAD-----PLRHYSASYG-----------ATGVQDKSYAPS 56

  Fly   202 ----------------GVGVAGAGTAWNANCTISGAAAQT-----------AAASSLHQASNHT- 238
                            ..|.||.......:|.:|....|:           |.:..|::..:..
 Frog    57 PYFQQPNGAYSRTAACDYGAAGFYRDKEVSCALSSLEEQSQFGQEQRKADCAHSKLLYEEQDEAK 121

  Fly   239 ----FYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGR 299
                .||||.....|     .|.:                              .|.:|  ||||
 Frog   122 CATPVYPWMQRMNSC-----NSSV------------------------------FGPSG--RRGR 149

  Fly   300 QTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQ----AIKEL 360
            ||||||||||||||||.|.|||||||||:||:||||||||||||||||||.|||.:    :::..
 Frog   150 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKESKLLNSSVQSA 214

  Fly   361 NEQEKQ 366
            .|.|::
 Frog   215 GEDEEK 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	50/55 (91%)
hoxb6	XP_002938066.1	Homeodomain	146..202	CDD:459649	50/55 (91%)