DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and bsx

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_001095280.1 Gene:bsx / 100124316 XenbaseID:XB-GENE-995770 Length:229 Species:Xenopus tropicalis


Alignment Length:121 Identity:39/121 - (32%)
Similarity:55/121 - (45%) Gaps:35/121 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 PDWLGTNGL------------------RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHAL 332
            |.:|.|:||                  ||:.|..::..|...|||.|....||:...|:|:|.||
 Frog    78 PFFLATSGLPVPALFPHHSELPGKHCRRRKARTVFSDSQLSGLEKRFELQRYLSTPERVELATAL 142

  Fly   333 CLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAAAAAAAAAAVQGGHLD 388
            .|:|.|:|.||||||||.||:   :::..:..|              .|:...|||
 Frog   143 SLSETQVKTWFQNRRMKHKKQ---LRKTQDDPK--------------TAMSDNHLD 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 26/55 (47%)
bsxNP_001095280.1 Homeodomain 106..162 CDD:459649 26/55 (47%)

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