DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubx and emx1l

DIOPT Version :10

Sequence 1:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_002936883.1 Gene:emx1l / 100101663 XenbaseID:XB-GENE-876649 Length:213 Species:Xenopus tropicalis


Alignment Length:76 Identity:30/76 - (39%)
Similarity:48/76 - (63%) Gaps:5/76 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKEL 360
            :|.|..::..|.|.||..|..|||:....|.::|::|||||.|:|:||||||.|.|::     :|
 Frog   116 KRIRTAFSPSQLLRLEGAFEKNHYVVGAERKQLANSLCLTETQVKVWFQNRRTKHKRQ-----KL 175

  Fly   361 NEQEKQAQAQK 371
            .|:..::|.::
 Frog   176 EEECPESQQKR 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 26/55 (47%)
emx1lXP_002936883.1 Homeodomain 116..172 CDD:459649 26/55 (47%)

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