DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment modSP and f9b

DIOPT Version :9

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001035400.1 Gene:f9b / 678552 ZFINID:ZDB-GENE-060421-7346 Length:507 Species:Danio rerio


Alignment Length:527 Identity:125/527 - (23%)
Similarity:185/527 - (35%) Gaps:165/527 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 TGGCISGSLSCNGENDCYD---GSDEAPLLCNTTKKVTTPVVTETPLELLGCPLPLGDERPILTG 237
            ||| :...:..|.|.:||:   ..:||..:....:|.....:|..                    
Zfish    44 TGG-LEEMMKDNLERECYEERCSLEEAREVFENNEKTMKFWITYM-------------------- 87

  Fly   238 DGSRVLTGPITRG--------------TVRFS--------CKQGYVLEGEESSYCAKNKWSTSTI 280
            ||.:.|:.|...|              ..|||        .||.:|..|....:|..:| ....:
Zfish    88 DGDQCLSSPCQNGGKCEDGMNTYTCWCPARFSGKNCELEMAKQCHVNNGGCMHFCIVDK-IYGAV 151

  Fly   281 PKCVKYCSTAGEFDGYSTKALCTHNGQQVECRKPFHPPGTEVKFVCST-------GFKTLSPLPE 338
            ..|.:....|  .||.|    |...||        :|.|...|.:..|       ..:|::....
Zfish   152 CDCAEGYRLA--VDGRS----CEPRGQ--------YPCGRLGKIIAQTLNSRALESTETVNQNQT 202

  Fly   339 MRCMKGGYWNRGRQRCEQDCGQL---ATP---IKQFSSGGY--TINNTV---------------- 379
            :..:.|..:|. .:....|..::   :||   ::..||...  .||||.                
Zfish   203 ISHINGTEYNT-TESSPTDLSEMNSTSTPRNSLQNVSSSPILTNINNTTNNKYRIVGGDEAIPGE 266

  Fly   380 VPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTRLPYSYDTFRVIAAKFYRNYGET 444
            :||.|   |:..:.:....||||||:.:.||||||||  ||.:            ..|:...|| 
Zfish   267 IPWQV---VFLEKVNKIVFCGGSLLSEEWVITAAHCV--EGKQ------------GSFFIRVGE- 313

  Fly   445 TPEEKRRDVRLIE------------IAPGYKGRTENYYQDLALLTLDEPFELSHVIRPICVTFAS 497
                  .||..:|            |.|.|..:...|..|:|||.|.:|..|.....|||:....
Zfish   314 ------HDVSKMEGTESDHGIEEYHIHPRYNSQRSLYNHDIALLKLKKPVILFDYAVPICLGSKD 372

  Fly   498 FAEK--ESVTDDVQGKFAGW----------NIENKHELQFVPAVSKSNSVCRRNLRD-IQADKFC 549
            |.|.  :|..:.:   .:||          |:..|.||.:|..:.     |:.:..| |....||
Zfish   373 FTENLLQSAENSL---VSGWGRLRYGGIESNVLQKVELPYVDRIK-----CKGSSTDSISRFMFC 429

  Fly   550 I-FTQGKSLACQGDSGGGFTSELPTNAFSTWNTARHFLFGVISNAPNADQCAH--SLTVMTNIQH 611
            . ::..:..||||||||...    |....||     ||.|::|   ..::||.  ...:.|.|..
Zfish   430 AGYSTVRKDACQGDSGGPHA----TRYKDTW-----FLTGIVS---WGEECAKEGKYGIYTRISK 482

  Fly   612 FEDMILN 618
            :...|.|
Zfish   483 YMAWITN 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060 7/25 (28%)
CCP <251..284 CDD:153056 9/40 (23%)
Sushi 309..354 CDD:278512 7/51 (14%)
Tryp_SPc 371..616 CDD:214473 78/290 (27%)
Tryp_SPc 371..591 CDD:304450 73/263 (28%)
f9bNP_001035400.1 GLA 23..86 CDD:214503 10/42 (24%)
EGF_CA 88..124 CDD:238011 8/35 (23%)
FXa_inhibition 131..167 CDD:291342 9/42 (21%)
Tryp_SPc 255..487 CDD:214473 74/275 (27%)
Tryp_SPc 256..490 CDD:238113 76/278 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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