Protein Alignment modSP and ldlrad3

DIOPT Version :9

• Sequence 1: NP_536776.2
• Gene: modSP / 42032
• FlyBaseID: FBgn0051217
• Length: 628
• Species: Drosophila melanogaster
• Sequence 2: NP_001124079.1
• Gene: ldlrad3 / 570705
• ZFINID: ZDB-GENE-030131-1533
• Length: 314
• Species: Danio rerio
• Alignment Length: 193
• Identity: 52/193 - (26%)
• Similarity: 68/193 - (35%)
• Gaps: 69/193 - (35%)

  Fly    32 FECDNGSCISQYDVCNGEKNCPDGSDETALTCVSQRQHCTKPYFQCTYGA-CVIGTAGCNGVNEC 95
            |.|.:|.|:.....|:|..:|.|.|||..  |:..:..|...:|.|..|. |:||...|||..:|
Zfish    33 FMCADGECVPAAGQCDGYPDCADRSDERG--CLKLKSKCASTFFSCANGVHCIIGRFQCNGFRDC 95

  Fly    96 ADGSDETRLRCGNEDDIRQHDRRLQGNCKENEFKCPSGICLDKSNFLCDGKDDCADGTGFDESVE 160
            .|||||                   .||..:...|.|
Zfish    96 PDGSDE-------------------DNCTAHPLLCSS---------------------------- 113

  Fly   161 LCGHMECPAYSFKCGTGGCISGSLSCNGENDCYDGSDEAPLLCNTTKKVTTPVVTETPLELLG 223
                     ..|.|..|.|:..|..|||:::|.|.|||..  |.||        .|:|..:||
Zfish   114 ---------LRFHCANGRCVDRSFLCNGQDNCQDNSDEEN--CLTT--------AESPEHMLG 157

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
modSP	NP_536776.2	LDLa	27..58	CDD:197566	9/25 (36%)
		LDLa	70..101	CDD:197566	14/31 (45%)
		LDLa	123..157	CDD:197566	3/33 (9%)
		LDLa	167..199	CDD:238060	12/31 (39%)
		CCP	<251..284	CDD:153056
		Sushi	309..354	CDD:278512
		Tryp_SPc	371..616	CDD:214473
		Tryp_SPc	371..591	CDD:304450
ldlrad3	NP_001124079.1	LDLa	30..62	CDD:238060	11/30 (37%)
		LDLa	69..104	CDD:238060	16/53 (30%)
		LDLa	111..145	CDD:238060	15/72 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.000