DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment modSP and sez6a

DIOPT Version :9

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:XP_001919970.5 Gene:sez6a / 562079 ZFINID:ZDB-GENE-030131-8208 Length:981 Species:Danio rerio


Alignment Length:589 Identity:101/589 - (17%)
Similarity:152/589 - (25%) Gaps:289/589 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLLKFRTIFAACDSSQFECDNG---------------SCISQYDVCNGEKNCPDGSDETALTCVS 65
            |:|::|....:| :|....|||               ||:..|.:          ....:|||  
Zfish   329 LILRYRAFALSC-ASPTTPDNGEVSVTGLHVGGVAYFSCLIGYQL----------QGPASLTC-- 380

  Fly    66 QRQHCTKPYFQCTYGACVIGTAG------------------------CNGVNECADG-------- 98
              ::.|.||:......|.:...|                        |:.:.|..:|        
Zfish   381 --RNATTPYWSGREPRCQVACGGMMRNATQGRVISPGFPGNYSNNLTCHWILEAPEGHRLHIHFE 443

  Fly    99 -----SDETRLRCGNEDDI----------------------RQH--------------------D 116
                 .|:.||...:..:|                      .||                    :
Zfish   444 KVALAEDDDRLLIKDGSNIDSPPLYDSYAVEYLPAEGVTSTGQHLFIEFTSDEMGTCTGTAIRYE 508

  Fly   117 RRLQGNCKEN--------------------EFKCPSGI----------CLDKSN----------- 140
            ...||:|.|.                    ||.|..|.          |:::.|           
Zfish   509 AFSQGSCYEPFVKYGNFSTTDPAFGVGSVVEFTCEPGYTLEQGAVILECVNEENPQWNETEPACR 573

  Fly   141 FLCDGKDDCADGTGFDESVELCGHMECPAYSFKCGTG-GCISG-------------SLSCNGEND 191
            .:|.|           |..:..|.:..|.:......| .||.|             .:...|:||
Zfish   574 AVCSG-----------EITDSAGVVLSPNWPEAYDKGQDCIWGLHVEEDKRFMLDVQVLHLGKND 627

  Fly   192 ---CYDGSD-------------------------------------------------------- 197
               .|||.|                                                        
Zfish   628 LLTIYDGDDLTANILGQYSGVLPRFRLYTSTADVTIQFQSDPASNVYGYNNGFVVHFFEVARNDT 692

  Fly   198 --EAPLLCNTTKKVTTPVVTETPL--------------ELLGCPLPL---GD----------ERP 233
              |.|.:.|..|..:.|.:|...:              |:|.|...|   ||          |.|
Zfish   693 CAELPEILNGWKSTSHPDLTHGTVITYQCYPGFRLQGAEILMCQWDLTWSGDVPLCEKIMSCEDP 757

  Fly   234 ILTGDGSRVLTGP--ITRGTVRFSCKQGYVLEGEESSYC-----AKNKWSTSTIPKCV--KY--C 287
            .|..:..|::|..  ....::.:.|.:||.|.|.....|     |..||| ..:||||  :|  |
Zfish   758 GLVENSRRMVTDSRYAVGSSIEYICNKGYSLSGPGVLICYGRETAVPKWS-EKLPKCVPERYEPC 821

  Fly   288 STAGEFDGYSTKALCTHNGQQVECRKPFHPPGTEVKFVCSTGFKTLSPLPEMRCMKG--GYWNRG 350
            |..|      ..:|...:.:     |.|...|..:.|.|..|: .|.....:.|:.|  ..|:..
Zfish   822 SNPG------APSLAIQSSE-----KAFFQAGETLSFTCRAGY-VLQGEATVHCLPGHPSRWSAA 874

  Fly   351 RQRC 354
            ...|
Zfish   875 PPMC 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566 8/45 (18%)
LDLa 70..101 CDD:197566 8/67 (12%)
LDLa 123..157 CDD:197566 10/74 (14%)
LDLa 167..199 CDD:238060 12/106 (11%)
CCP <251..284 CDD:153056 12/37 (32%)
Sushi 309..354 CDD:278512 10/46 (22%)
Tryp_SPc 371..616 CDD:214473
Tryp_SPc 371..591 CDD:304450
sez6aXP_001919970.5 CUB 230..335 CDD:294042 2/5 (40%)
CCP 340..395 CDD:214478 14/69 (20%)
CUB 399..509 CDD:238001 10/109 (9%)
Sushi 515..572 CDD:278512 8/56 (14%)
CUB 576..685 CDD:238001 16/119 (13%)
CCP 693..749 CDD:153056 12/55 (22%)
CCP 754..814 CDD:153056 17/60 (28%)
CCP 821..879 CDD:153056 15/70 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.