DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and CG5246

DIOPT Version :9

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster


Alignment Length:265 Identity:61/265 - (23%)
Similarity:96/265 - (36%) Gaps:58/265 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 GGYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTRLPYSYDTFRVIAA 435
            ||........|:.|.:.   |....|. ||||::.|..::|||||:     ..|..|  .:::..
  Fly    44 GGVDSPTGFAPYQVSIM---NTFGEHV-CGGSIIAPQWILTAAHCM-----EWPIQY--LKIVTG 97

  Fly   436 KFYRNYGETTPEEKRRDVRLIEIAPGYKGRTEN----YYQDLALLTLDEPFELSHVIRPICVTFA 496
            ..  :|  |.|..:       .:..|.|....:    |:.|:||:...:|.....:.:||  ..|
  Fly    98 TV--DY--TRPGAE-------YLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPI--KLA 149

  Fly   497 SFAEKESVTDDVQGKFAGWNIE----------NKHELQFVPAVSKSNSVCRRNLRDIQADKFCIF 551
            |......|.|.:  ...||...          .|.:|.::...:..:.|  ||...:.....|.|
  Fly   150 SKGSLPKVGDKL--TLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRV--RNANWLSEGHVCTF 210

  Fly   552 TQGKSLACQGDSGGGFTSELPTNAFSTWNTARHFLFGVISNAPNADQCAHSL-TVMTNIQHFEDM 615
            ||....:|.|||||....            |...|.||::   ..:.||... .|..::.::.|.
  Fly   211 TQEGEGSCHGDSGGPLVD------------ANQTLVGVVN---WGEACAIGYPDVFGSVAYYHDW 260

  Fly   616 ILNAM 620
            |...|
  Fly   261 IEQMM 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Sushi 309..354 CDD:278512
Tryp_SPc 371..616 CDD:214473 59/259 (23%)
Tryp_SPc 371..591 CDD:304450 55/233 (24%)
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 59/259 (23%)
Tryp_SPc 42..263 CDD:238113 60/261 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468807
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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