DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and CG18223

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_649077.1 Gene:CG18223 / 40068 FlyBaseID:FBgn0036832 Length:322 Species:Drosophila melanogaster


Alignment Length:255 Identity:52/255 - (20%)
Similarity:96/255 - (37%) Gaps:59/255 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 DYHFQCGGSLLTPDLVITAAHCVYDEGTRLPYSYDTFRVIAAKFYRNYGETTPEEKRR------D 452
            |.|| |||.:::...::|:|||..|: .::.:......|:|       |.|...:.|:      :
  Fly    75 DNHF-CGGVIISRTYILTSAHCAMDK-RKIVHRSRVLVVVA-------GTTNRLKSRKGLSLNME 130

  Fly   453 VRLIEIAPGYKGRTENYYQDLALLTLDEPFELSHVIRPICVTFASFAEKESVTDDVQGKFAGWNI 517
            |:.|.:...:.....|   ::||:.|.:...|.:.:  :.|.....|:.|   ..:.....||..
  Fly   131 VKKIFVPDKFTVFNTN---NIALMMLAKKLPLDNPL--VGVINLPTADPE---PGLNYTVLGWGR 187

  Fly   518 ENK---------H-ELQFVPAVSKSNSVCRRNLRDIQADKFCIFTQGKSL---ACQGDSGGGFTS 569
            ..|         | :::.:|     ..:|.:.:...:.:..|......::   .|.||:|    |
  Fly   188 IFKGGPLASDILHIDVELLP-----RDICEKKVHIFKEEMMCAGNLNNTMDENPCAGDTG----S 243

  Fly   570 ELPTNAFSTWNTARHFLFGVISNAPNADQCAHSL--TVMTNIQHFEDMILNAMNRSVETR 627
            .|..|         ..:|||:|....   |....  ::.||:....|.|...||.:...|
  Fly   244 PLIFN---------ETVFGVVSYRVG---CGSKTLPSIYTNVYMHMDWINGIMNNNEANR 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 48/242 (20%)
CG18223NP_649077.1 Tryp_SPc 60..280 CDD:214473 48/242 (20%)
Blue background indicates that the domain is not in the aligned region.

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