DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and CG7542

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster


Alignment Length:282 Identity:64/282 - (22%)
Similarity:103/282 - (36%) Gaps:62/282 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 LATPIKQFSSGGYTINNTVVPWHVGLYV----WHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGT 421
            |.|.::.:.:.|........|:..||.|    |..      .|||:|::...:||||||:  :|.
  Fly    19 LLTDVEPYITNGEPAEVGQFPYQAGLNVSFGNWST------WCGGTLISHYWIITAAHCM--DGA 75

  Fly   422 RLPYSYDTFRVIAAKFYRNYGETTPEEKRR---DVRLIEIAPGYKGRTENYYQDLALLTLDEPFE 483
            .....|     :.|   .|.|:.:.|.:.|   :...|.:...|...|  ...|::|:.|     
  Fly    76 ESVTVY-----LGA---INIGDESEEGQERIMVEKSGIIVHSNYMAST--VVNDISLIRL----- 125

  Fly   484 LSHVIRPICVTFASFAEKESVTDDVQGKF----------AGWNIENKHE------LQFVPAVSKS 532
                  |..|.|.......|:...:.|:|          :||..|:...      |::|......
  Fly   126 ------PAFVGFTDRIRAASLPRRLNGQFPTYESIRAFASGWGRESDASDSVSPVLRYVEMPIMP 184

  Fly   533 NSVCRRNLRDIQADK-FCIFTQGKSLACQGDSGGGFTSELPTNAFSTWNTARHFLFGVISNAPNA 596
            :|:||.......::| .|:.|......|.|||||....:...:::...:|:.....|.....|  
  Fly   185 HSLCRMYWSGAVSEKMICMSTTSGKSTCHGDSGGPLVYKQGNSSYLIGSTSFGTSMGCQVGFP-- 247

  Fly   597 DQCAHSLTVMTNIQHFEDMILN 618
                   .|.|.|..:.|.|||
  Fly   248 -------AVFTRISSYLDWILN 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 59/268 (22%)
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 62/274 (23%)
Blue background indicates that the domain is not in the aligned region.

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