DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment modSP and Jon25Bi

DIOPT Version :9

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001033873.1 Gene:Jon25Bi / 33708 FlyBaseID:FBgn0020906 Length:266 Species:Drosophila melanogaster


Alignment Length:239 Identity:57/239 - (23%)
Similarity:84/239 - (35%) Gaps:70/239 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 GYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHC--------VYDEGTRLPYSYD 428
            ||.......|:.|||....|.   .:.||||::..|.|:|||||        :|...|....:..
  Fly    40 GYPAYEGKAPYTVGLGFSGNG---GWWCGGSIIAHDWVLTAAHCTNGASQVTIYYGATWRTNAQF 101

  Fly   429 TFRVIAAKFYRNYGETTPEEKRRDVRLIEIAPGYKGRTENYYQDLALLTLDEPFELSHVIRPICV 493
            |..|.:..|.:|:  ..|.:...|:.||        ||.:             .:..|::..  |
  Fly   102 THTVGSGDFIQNH--NWPNQNGNDIALI--------RTPH-------------VDFWHMVNK--V 141

  Fly   494 TFASFAEKESVTDDVQGKFAGWNIENKH---------ELQFVPAVSKSNSVCRRNLRDIQADKFC 549
            ...||.::.::.|:......||.:....         :||.:     |||.|.|..........|
  Fly   142 ELPSFNDRYNMYDNYWAVACGWGLTTAGSQPDWMECVDLQII-----SNSECSRTYGTQPDGILC 201

  Fly   550 IFTQGKSLACQGDSGG--------------------GFTSELPT 573
            :.|.|....|.|||||                    |.|:.||:
  Fly   202 VSTSGGKSTCSGDSGGPLVLHDGGRLVGVTSWVSGNGCTAGLPS 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Sushi 309..354 CDD:278512
Tryp_SPc 371..616 CDD:214473 57/239 (24%)
Tryp_SPc 371..591 CDD:304450 57/239 (24%)
Jon25BiNP_001033873.1 Tryp_SPc 36..257 CDD:214473 57/239 (24%)
Tryp_SPc 37..260 CDD:238113 57/239 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436806
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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