DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and psh

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:406 Identity:103/406 - (25%)
Similarity:152/406 - (37%) Gaps:120/406 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 TSTIPKCVKYCSTAGE----FDGYSTKALCTHN----------GQQVEC-RKPFHPPGTEVKFVC 326
            |.|:|   ..|.|:.:    .|||....:.|.|          |:...| .||.....|......
  Fly    33 TDTMP---GICRTSSDCEPLIDGYIKSGVLTLNDVPSCGLGAWGEIFCCPTKPCCDNSTITSVST 94

  Fly   327 STGFKTLSPLPEMR----------------CMKGGYWNRGRQRCEQDCG-QLATPIKQFSSGGYT 374
            |:...|.:|:...|                |.|      .|:|.:|..| ||...|    .|||.
  Fly    95 SSTTSTKAPMTSGRVDVPTFGSGDRPAVAACKK------IRERKQQRSGNQLVIHI----VGGYP 149

  Fly   375 INNTVVPWH---VGLYVWHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTRLPYSYDTFRVIAAK 436
            ::..|.| |   :|...:..:    |:|||||:....|:||||||..:.     :...|..:.|.
  Fly   150 VDPGVYP-HMAAIGYITFGTD----FRCGGSLIASRFVLTAAHCVNTDA-----NTPAFVRLGAV 204

  Fly   437 FYRNYGETTPEEKRRD--VRLIEIAPGYKGRTENYYQDLALLTLDEPFELSHVIRPICVTFASFA 499
            ...|     |:...:|  :|.::|.|.|.|   |.|.|:|:|.|:.....:..|||.|:      
  Fly   205 NIEN-----PDHSYQDIVIRSVKIHPQYVG---NKYNDIAILELERDVVETDNIRPACL------ 255

  Fly   500 EKESVTDDVQGKF--AGWNIENKHELQFVPAVSKSNSVCRRNLRDIQADKFC------------I 550
            ..::.......||  |||.:.|      |...::|..:.|..|..:..|: |            :
  Fly   256 HTDATDPPSNSKFFVAGWGVLN------VTTRARSKILLRAGLELVPLDQ-CNISYAEQPGSIRL 313

  Fly   551 FTQG--KSL-----------ACQGDSGGGFTSELPTNAFSTWNTARHFLFGVISNAPNADQCAHS 602
            ..||  .||           ||:|||||....||..      ....:.:.||||:...   || :
  Fly   314 LKQGVIDSLLCAIDQKLIADACKGDSGGPLIHELNV------EDGMYTIMGVISSGFG---CA-T 368

  Fly   603 LT--VMTNIQHFEDMI 616
            :|  :.|.:..:.|.|
  Fly   369 VTPGLYTRVSSYLDFI 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056 3/6 (50%)
Tryp_SPc 371..616 CDD:214473 74/278 (27%)
pshNP_573297.1 CLIP 30..79 CDD:197829 11/48 (23%)
Tryp_SPc 144..387 CDD:238113 76/286 (27%)
Blue background indicates that the domain is not in the aligned region.

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