DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment modSP and spirit

DIOPT Version :9

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001162707.1 Gene:spirit / 31797 FlyBaseID:FBgn0030051 Length:393 Species:Drosophila melanogaster


Alignment Length:295 Identity:75/295 - (25%)
Similarity:122/295 - (41%) Gaps:76/295 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 EQDCGQL--ATPIKQFSS------GGYTINNTVVPWHVGLYVWHNEKD--YHFQCGGSLLTPDLV 409
            :|.|.:|  .:.:|:...      ||........|:...| .|.:..|  .:::|||:|:..:.|
  Fly   110 QQACNELNKVSKVKEIDEFFVSVVGGMPTRPREFPFMAAL-GWRSNFDQRIYYRCGGALIANNFV 173

  Fly   410 ITAAHCVYDEGTRLPYSYDTFRVIAAKFYRNYGE--TTPEEKRRDVRLIEIAPGYKGRTENYYQD 472
            :|||||. |.|...|..           .|..|:  |..|.:...:|.:.|.|.|...|.  |.|
  Fly   174 LTAAHCA-DLGGEPPSQ-----------VRLGGDNLTLTEGEDISIRRVIIHPDYSASTA--YND 224

  Fly   473 LALLTLDEPFELSHVIRPICVTFASFAEKESVTDDV-------QGKFAGWNIENKHELQFVPAVS 530
            :|||.|:...:..  ::|.|:    :.:|| ||:.:       |..|||.   :..:|..||..|
  Fly   225 IALLELETAAKPE--LKPTCI----WTQKE-VTNTLVTAIGYGQTSFAGL---SSAQLLKVPLKS 279

  Fly   531 KSNSVCRRNLRDIQADKFCIFTQ-------GKSLACQGDSGG-------------GFTS------ 569
            .||..|:.:.:..|..:..:.||       |:...|||||||             |.||      
  Fly   280 VSNEECQHHYQKDQLAQGVLGTQMCAGDITGERDTCQGDSGGPLLMQDGLLGYVVGITSLGQGCA 344

  Fly   570 ELPTNAFSTWNTARHFLFGV------ISNAPNADQ 598
            ..|.:.::..::...::.|:      ::|||..:|
  Fly   345 SGPPSVYTRVSSFVDWIEGIVWPAQQVTNAPQPNQ 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Sushi 309..354 CDD:278512
Tryp_SPc 371..616 CDD:214473 71/271 (26%)
Tryp_SPc 371..591 CDD:304450 67/262 (26%)
spiritNP_001162707.1 CLIP 51..98 CDD:197829
Tryp_SPc 132..364 CDD:238113 66/256 (26%)
Tryp_SPc 132..361 CDD:214473 66/253 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437633
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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