DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and CG18420

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:302 Identity:71/302 - (23%)
Similarity:115/302 - (38%) Gaps:73/302 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 QRCEQDCGQLATPIK---QFSSGGYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAA 413
            |..:.:|| ..:|:|   :..:|...:.|: .||...|:...|:    |.|||:|::..||:|||
  Fly    25 QFLDSECG-TRSPLKLGPRIVNGKVAVRNS-SPWMAFLHTSSNQ----FICGGTLISRRLVLTAA 83

  Fly   414 HCVYDEGTRLPYSYDTFRVIAAKFYRNYGETTPEEKRRDVRLIEIAPGYKGRTENYY-------- 470
            ||.....|.:                             |||.|.....||..|.:.        
  Fly    84 HCFIPNTTIV-----------------------------VRLGEYNRKLKGYREEHQVNRTFQHR 119

  Fly   471 --------QDLALLTLDEPFELSHVIRPICVTF-ASFAEKESVTDDVQGKFAGW-NIENKH---E 522
                    .|:|||.|.........|||||:.: ||:.........:.|  .|| ..|:.|   |
  Fly   120 FYDPNTHANDIALLRLVSNVVYKANIRPICIMWDASWKHHIDSIKVLTG--TGWGRTESMHDSSE 182

  Fly   523 LQFVPAVSKSNSVCRRNLRDIQADKFCIFTQGKSLACQGDSGGGFTSELPTNAFSTWNTARHFL- 586
            |:.:....:.:.:|.  ...:.:::||......:| |.||:||      |..|...:..|..|: 
  Fly   183 LRTLDISRQPSKMCA--FGSVLSNQFCAGNWNSNL-CIGDTGG------PVGAMVRYRNAFRFVQ 238

  Fly   587 FGVISNAPNADQCAHSLTVMTNIQHFEDMIL--NAMNRSVET 626
            .|:........:.:....||::|:....:.|  |..:|:..|
  Fly   239 VGIAITNKRCQRPSVFTDVMSHIEFIRRIFLTQNGNDRNQPT 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 62/266 (23%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 62/266 (23%)
Blue background indicates that the domain is not in the aligned region.

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