DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment modSP and CG33461

DIOPT Version :9

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_995843.3 Gene:CG33461 / 2768840 FlyBaseID:FBgn0053461 Length:287 Species:Drosophila melanogaster


Alignment Length:240 Identity:57/240 - (23%)
Similarity:95/240 - (39%) Gaps:62/240 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 EQDCGQLATPIKQFSSGGYTINNTVVPWHVGLYVW----HNEKDYHFQCGGSLLTPDLVITAAHC 415
            |::||  ..|...:.    .||.|  |..:|.|.|    |...  :|.|.|||:....|:|:|||
  Fly    29 EENCG--VVPRLSYK----IINGT--PARLGRYPWMAFLHTPT--YFLCAGSLINQWFVLTSAHC 83

  Fly   416 VYDEGTRLPYSYDTFRVIAAKFYRNYGETTPEEKRRDV-----RLIEIAPGY------KGR---T 466
            :.|:               .:.....||   ..:..|:     |.:|....|      |.|   .
  Fly    84 IEDD---------------VELIARLGE---NNRDNDIDCENNRCLEATQEYNVDMLFKHRLYDP 130

  Fly   467 ENYYQDLALLTLDEPFELSHVIRPICVTFASFAEK--ESVTDDVQG-KFAGW-------NIENKH 521
            :::..|:.:|.|:...|.::.|:|||:    |..:  :.|.|.:.. |..||       |.::..
  Fly   131 KDFSNDIGMLRLERRVEYTYHIQPICI----FHHRRMQLVVDQITWFKATGWGLTSTDLNTKSSR 191

  Fly   522 ELQFVPAVSKSNSVCRRNLR-DIQADKFCIFTQGKSLACQGDSGG 565
            .|..:....:..:.|.|..: :..:.:.|......:| |:|||||
  Fly   192 VLMELNLYRRPRNDCARIFKQNFLSGQICAGNDDGNL-CRGDSGG 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Sushi 309..354 CDD:278512
Tryp_SPc 371..616 CDD:214473 53/224 (24%)
Tryp_SPc 371..591 CDD:304450 53/224 (24%)
CG33461NP_995843.3 Tryp_SPc 41..278 CDD:214473 53/226 (23%)
Tryp_SPc 42..281 CDD:238113 53/221 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437345
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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