DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and CG30088

DIOPT Version :10

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:246 Identity:63/246 - (25%)
Similarity:97/246 - (39%) Gaps:58/246 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 YVWHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTRLPYSYDTFRVIAAKFYRN----YGETTPE 447
            |::::.:   ..|||::::...::|||||:      .||.  ..|:......||    .|..:|.
  Fly    61 YLYYSSE---IHCGGTIISSRYILTAAHCM------RPYL--KVRLGEHDITRNPDCQGGSCSPP 114

  Fly   448 EKRRDVRLIEIAPGYKGRTENYYQDLALLTLDEPFELSHVIRPICV-----------TFASFAEK 501
            .:..|   |.:|..||........|:|||.|......:..|:|||:           .|.:|   
  Fly   115 AEEFD---IVLATKYKRFDRFLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQAF--- 173

  Fly   502 ESVTDDVQGKFAGW-NIENKHE---LQFVPAVSKSNSVCRRNL-RDIQADKFCIFTQGKSLACQG 561
                        || ..|..|.   ||........|..||..| ..|..::.|:..|| |..|.|
  Fly   174 ------------GWGQTETNHSANVLQTTVLTRYDNRHCRSVLSMPITINQLCVGFQG-SDTCSG 225

  Fly   562 DSGGGFTSELPTNAFSTWNTARHFLFGVISNAPNADQCAHSLTVMTNIQHF 612
            ||||...:::  |....|   |:...|::|...  |:| .|..|.|.:.::
  Fly   226 DSGGPLVTKV--NYDGVW---RYLQLGIVSFGD--DKC-QSPGVYTYVPNY 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 63/246 (26%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 63/246 (26%)
Blue background indicates that the domain is not in the aligned region.

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