DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment modSP and Sez6

DIOPT Version :9

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_067261.2 Gene:Sez6 / 20370 MGIID:104745 Length:991 Species:Mus musculus


Alignment Length:382 Identity:80/382 - (20%)
Similarity:119/382 - (31%) Gaps:112/382 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QFECDNG----------SCISQYD------------VCNGEKNCPDGSDETALTCVSQRQHCTKP 73
            :|.||.|          .|:..:|            ||:||.....|        |....:..:|
Mouse   553 EFSCDPGYTLEQGSIIIECVDLHDPQWNETEPAC
RAVCSGEITDSAG--------VVLSPNWPEP 609

  Fly    74 YFQ---CTYGACV-----------IGTAGCNGVNECADGSDETRLRCGNEDDIRQHDR------- 117
            |.:   |.:|..|           :...|...|....||.|.|....|.....|.|.:       
Mouse   610 YGRGQDCIWGVHVEEDKRIMLDIRVLRIGSGDVLTFYDGDDLTARVLGQYSGPRGHFKLFTSMAD 674

  Fly   118 ---RLQGNCKENEFKCPSGICLD----KSNFLCDGKDDCADGTGFDESVELCGHMECPAYSFKCG 175
               :.|.:...:......|..:.    ..|..|....:..:|.......||   :.....:::|.
Mouse   675 VTIQFQSDPGTSALGYQQGFVIHFFEVPRNDTCPELPEIPNGWKNPSQPEL---VHGTVVTYQCY 736

  Fly   176 TGGCISGS--LSCNGENDCYDGSDEAPLLCNTTKKVTTPVVTETPLELLGCP-LPLGDERPILTG 237
            .|..:.||  |.|..:   ...|::.| .|........|...|....|:..| .|:|        
Mouse   737 PGYQVVGSSILMCQWD---LSWSEDLP-SCQRVTSCHDPGDVEHSRRLISSPKFPVG-------- 789

  Fly   238 DGSRVLTGPITRGTVRFSCKQGYVLEGEESSYC-----AKNKWSTSTIPKCV----KYCSTAGEF 293
                        .||::.|.||:||.|.....|     ...||| ...|||:    |.|      
Mouse   790 ------------ATVQYVCDQGFVLTGSAILTCHDRQAGSPKWS-DRAPKCLLEQFKPC------ 835

  Fly   294 DGYSTKALCTHNGQQVECRKPFHPPGTEVKFVCSTGFKTLSPLPEMRCMKG--GYWN 348
            .|.|    ...||.: ...|..||.|..:.|.|:.|: .|.....::|:.|  .:|:
Mouse   836 HGLS----APENGAR-SPEKRLHPAGATIHFSCAPGY-VLKGQASIKCVPGHPSHWS 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566 11/48 (23%)
LDLa 70..101 CDD:197566 9/44 (20%)
LDLa 123..157 CDD:197566 4/37 (11%)
LDLa 167..199 CDD:238060 7/33 (21%)
CCP <251..284 CDD:153056 14/37 (38%)
Sushi 309..354 CDD:278512 11/42 (26%)
Tryp_SPc 371..616 CDD:214473
Tryp_SPc 371..591 CDD:304450
Sez6NP_067261.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..193
CUB 241..349 CDD:238001
CCP 354..410 CDD:153056
CUB 413..523 CDD:238001
Sushi 529..586 CDD:278512 6/32 (19%)
CUB 590..699 CDD:238001 21/116 (18%)
CCP 707..763 CDD:153056 12/62 (19%)
CCP 768..827 CDD:214478 19/79 (24%)
CCP 835..893 CDD:153056 16/64 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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