DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment modSP and Dmbt1

DIOPT Version :9

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:XP_006507361.2 Gene:Dmbt1 / 12945 MGIID:106210 Length:2061 Species:Mus musculus


Alignment Length:701 Identity:136/701 - (19%)
Similarity:213/701 - (30%) Gaps:247/701 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NGSCISQYDVCNGEKN-------------CPDGSDETALTCVSQRQHCTKPYFQCTYGACVIGTA 87
            |.|.|::  ||:|...             ..|||             .|:..||..|.:.|....
Mouse  1306 NSSLIAR--VCDGSNGSFTSTGNFMSVVFITDGS-------------VTRRGFQAHYYS
TVSTNY 1355

  Fly    88 GCNGVNECADGSDET---------RLRCG--------NEDDIRQHDRRLQGNCKENEFKCPSGIC 135
            .|.|:.....|...:         .:||.        |...:...|.:|:|.|..:......|..
Mouse  1356 SCGGLLTQPSGQFSSPHYPSNYPNNVRCSWEILVPSMNRVTVAFTDVQLEGGCSFDYILVYDGPE 1420

  Fly   136 LDKSNF--LCDGKDDCADGTG--------FDESVELCGHMECPAY----------SFKCGTGG-- 178
            .:.|..  :|||.:.....||        .|.||...|..   ||          ||...||.  
Mouse  1421 YNSSLIAPVCDGFNGSFTSTGNFMSVVFITDGSVTRRGFQ---AYYYSTVSTSPPSFPNITGNDS 1482

  Fly   179 -----CISGSLSCNGEND----------CYD--GSDEAPLLCNTTKKVTTPVVTETPLELLGCPL 226
                 .::||..|.|..:          |.|  |..:|.::|..                |||  
Mouse  1483 SLALRLVNGSNRCEGRVEILYRGSWGTVCDDSWGISDANVVCRQ----------------LGC-- 1529

  Fly   227 PLGDERPILTGDGSRVLTGPITRGTVRFSCKQGYVLEGEESSYCAKNKWSTSTIPKCVKYCSTAG 291
                        || .|:.|   |...|....|.::..:.|                   ||   
Mouse  1530 ------------GS-ALSAP---GNAWFGQGSGLIVLDDVS-------------------CS--- 1556

  Fly   292 EFDGYSTKAL-CTHNGQQV-ECRKPFHPPGTEVKFVCSTGFKTLSPLPEMRCMKGGYWNRGRQRC 354
               ||.:... |.|.|..| .||   |.....|  :|:        |||:.....|:|.......
Mouse  1557 ---GYESHLWNCHHPGWLVHNCR---HSEDAGV--ICA--------LPEVTSPSPGWWTTSPSYV 1605

  Fly   355 EQDCGQLAT-PIKQFSSGGYTINNTVVPWHVGLY------VWHNEKDYHFQCGGSLLTPDLVITA 412
            ...||...| |..||||          |::.|.|      :|:.|...:::.  :::..||.:..
Mouse  1606 NYTCGGFLTQPSGQFSS----------PFYPGNYPNNARCLWNIEVPNNYRV--TVVFRDLQLER 1658

  Fly   413 AHCVYDEGTRLPYSYDTFRVIAAKFYRNYGETTPEEKRRDVRLIE----IAPGYKGRTENYYQDL 473
            . |.||........:.:..:||.....:.|..|.......:|.|.    .|.|::.   :||.|.
Mouse  1659 G-CSYDYIEIFDGPHHSSPLIARVCDGSLGSFTSTSNFMSIRFITDHSITARGFQA---HYYSDF 1719

  Fly   474 ALLTLDEPFELSHVIRPICVTF---ASFAEKESVTDDVQGKFAGWNI------------------ 517
            ...|.:...:.:|:...:..::   ..::.::.|       ..|||.                  
Mouse  1720 DNNTTNLLCQSNHMQASVSRSYLQSMGYSARDLV-------IPGWNSSYHCQPQITQREVIFTIP 1777

  Fly   518 ------------ENKHELQFVPAVSKSNSVCRRNLRDIQADKFC----------IFTQGKSLACQ 560
                        |..:...|:.|| .||.:.:|. :|:.....|          ::....::..|
Mouse  1778 YTGCGTIKQADNETINYSNFLRAV-VSNGIIKRR-KDLNIHVSCKMLQNTWVNTMYITNNTVEIQ 1840

  Fly   561 GDSGGGFTSELPTNAFSTWNTARHFLFGVISNAPNADQCAHSLTVMTNIQH 611
            ....|.|...:      ::.|:..|||.|.| :|.......:|.:...|.|
Mouse  1841 EVQYGNFDVNI------SFYTSSSFLFPVTS-SPYYVDLDQNLYLQAEILH 1884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566 9/34 (26%)
LDLa 70..101 CDD:197566 8/30 (27%)
LDLa 123..157 CDD:197566 8/43 (19%)
LDLa 167..199 CDD:238060 13/60 (22%)
CCP <251..284 CDD:153056 3/32 (9%)
Sushi 309..354 CDD:278512 11/45 (24%)
Tryp_SPc 371..616 CDD:214473 49/294 (17%)
Tryp_SPc 371..591 CDD:304450 44/272 (16%)
Dmbt1XP_006507361.2 SR 33..133 CDD:214555
SR 152..252 CDD:214555
SR 301..401 CDD:214555
SR 439..539 CDD:214555
SR 578..678 CDD:214555
SR 717..817 CDD:214555
SR 856..956 CDD:214555
CUB 999..1107 CDD:238001
CUB 1115..1223 CDD:238001
CUB 1241..1349 CDD:238001 13/57 (23%)
CUB 1357..1465 CDD:238001 23/110 (21%)
SR 1486..1585 CDD:214555 32/162 (20%)
CUB 1609..1717 CDD:238001 27/123 (22%)
ZP 1728..1975 CDD:214579 27/173 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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