DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and CG43335

DIOPT Version :9

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001247121.1 Gene:CG43335 / 12798413 FlyBaseID:FBgn0263040 Length:281 Species:Drosophila melanogaster


Alignment Length:245 Identity:65/245 - (26%)
Similarity:91/245 - (37%) Gaps:75/245 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 EQDCGQLATPIKQFSS----GGYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHC 415
            |.:||....|  .|..    ||.....|..||...||     .::|:.|.|:|:|...|:|||||
  Fly    26 EPNCGIRTMP--SFHRTRIIGGSDAEITSHPWMAYLY-----NEFHYFCAGTLITNQFVLTAAHC 83

  Fly   416 VYDE--------GTRLPYS-----------YDTFRVIAAKFYRNYGETTPEEKRRDVRLIEIAPG 461
            :...        |:.|..|           |.....|..|::      ||.....|:.:|.:|  
  Fly    84 IEASKNLTVRLGGSGLTRSDGSMCQITAEDYSVSMAIKHKYF------TPSIMLNDIAMIRLA-- 140

  Fly   462 YKGRTENYYQDLALLTLDEPFELSHVIRPICVTFASFAEKESVTDDVQGKFAGWNIENK----HE 522
               ||..:|..               |||||:.... |.:..:.|.:.....||.:.:|    |.
  Fly   141 ---RTVKFYDH---------------IRPICIILDP-AVRLLLEDGMTLMATGWGLADKRMHPHL 186

  Fly   523 LQFVPAVSKSNSVCRRNLRDIQADKFCIFTQGKSLA-------CQGDSGG 565
            ||..|....:.:||.: |.|:      ..|||:..|       |.|||||
  Fly   187 LQEAPITVMNRNVCSK-LYDV------AITQGQICAGDKETNTCLGDSGG 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Sushi 309..354 CDD:278512
Tryp_SPc 371..616 CDD:214473 60/225 (27%)
Tryp_SPc 371..591 CDD:304450 60/225 (27%)
CG43335NP_001247121.1 Tryp_SPc 41..272 CDD:214473 60/228 (26%)
Tryp_SPc 42..275 CDD:238113 60/227 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437267
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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