DRSC/TRiP Functional Genomics Resources

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Protein Alignment modSP and CG43124

DIOPT Version :9

Sequence 1:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001247345.1 Gene:CG43124 / 12798282 FlyBaseID:FBgn0262587 Length:245 Species:Drosophila melanogaster


Alignment Length:292 Identity:55/292 - (18%)
Similarity:103/292 - (35%) Gaps:90/292 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 CMKGGYWNRGRQRCEQDCGQLATPIKQFSSGGYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLT 405
            |:...::....|..|:||   ...:::.:...|      .||...:.     .|....|.|:|:.
  Fly    10 CIVLMFYQGSAQTLEEDC---VDHMERINGSSY------APWLAEIL-----SDSKVICAGALIN 60

  Fly   406 PDLVITAAHCVYDEGTRLPY---------SYDTFRVIAAKFYRNYGETTPEEKRRDVRLIEIAPG 461
            ...|:|||.| :.|..:|..         ||:.|||..|.|:..:...                 
  Fly    61 NLYVLTAASC-FKENEKLTVRLGSGYFDKSYENFRVTKAYFWMTHFPA----------------- 107

  Fly   462 YKGRTENYYQDLALLTLDEPFELSHVIRPICVTFASFAEKESVTDDVQGKFAGWNIENKHELQFV 526
                  |...:|.:..|....|....|||:|:|.:..:...:.|.::        |..|.::.: 
  Fly   108 ------NNTNNLCIFRLQTEVEFKTHIRPMCITKSPKSLGLATTFEI--------INEKPKMWY- 157

  Fly   527 PAVSKSNSVCRRNLRDIQADKFC--IFTQGKSLACQGDSGGGFTSELPTNAFSTWNTARHFLFGV 589
                    .| :|::.:    ||  :|         |::...:.|: ||.  |.|..       .
  Fly   158 --------FC-KNIKGL----FCKYVF---------GENEEKWQSK-PTG--SPWTE-------T 190

  Fly   590 ISNAPNADQCAHSLTVMTNIQHFEDMILNAMN 621
            |||.|......:.:....:.:.::::.:|.|:
  Fly   191 ISNGPFKGLVRYGILSYRDNKTYDEVYINVMS 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Sushi 309..354 CDD:278512 2/12 (17%)
Tryp_SPc 371..616 CDD:214473 48/255 (19%)
Tryp_SPc 371..591 CDD:304450 44/230 (19%)
CG43124NP_001247345.1 Tryp_SPc 41..>133 CDD:304450 27/120 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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