DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and CCT2

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_012124.1 Gene:CCT2 / 854664 SGDID:S000001404 Length:527 Species:Saccharomyces cerevisiae


Alignment Length:559 Identity:162/559 - (28%)
Similarity:266/559 - (47%) Gaps:90/559 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILVLSQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVM-TNDGNAILREI 71
            :.:.......|.....:|.......|:.|::::.|||:.|.|:|........| ||||..||:.|
Yeast     3 VQIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSI 67

  Fly    72 TVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFL-QQQIHPTVIIRAYREALEDIV 135
            .:.:||||.::.|::.||:|||||||||.||:.|:|..||..: |.:|||..||..||.|     
Yeast    68 PLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLA----- 127

  Fly   136 GHLQSQLSIQLDVKDKA-------------KMADVVKACVGTKFIGKWSDLAVKIALDAVETVTL 187
                  .:..||...||             .:..:.|..:.:|.:.:..|...::|.:|:  :.|
Yeast   128 ------SAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAI--LRL 184

  Fly   188 SENGRLEVDIKRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKG 252
            ..:..||     :.::.||.||.:.:|.:.:|.::.|...:.:.:| |||.:|::.:.:|:..| 
Yeast   185 KGSTNLE-----HIQIIKILGGKLSDSFLDEGFILAKKFGNNQPKR-IENAKILIANTTLDTDK- 242

  Fly   253 ESQTNVEIIGEQ---DFT-RMLQIEE-------------------EFVQRICADIIAVKPDLVFT 294
                 |:|.|.:   |.| ::.|:|:                   .|:.|   .:|...|:.:||
Yeast   243 -----VKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINR---QLIYDYPEQLFT 299

  Fly   295 EKGVSDLAQHYLLKAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIGD 359
            :.|::.: :|    |....:.||        |...|..:|:..:|.::..:|. ..:.|...:|:
Yeast   300 DLGINSI-EH----ADFEGVERL--------ALVTGGEVVSTFDEPSKCKLGE-CDVIEEIMLGE 350

  Fly   360 EYFTFVTECKEPKACTILLRGASKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLL 424
            :.|...:.||..:||||:||||:...|:|.||:|.|||.|......|.|.|.|||..||..|:.:
Yeast   351 QPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAV 415

  Fly   425 -TRKQ-VKGPYT----AVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGES 483
             |..| :.|..:    |.|.||..:|..||.|.|.::...::.||    |...:|:...|:|..:
Yeast   416 DTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLR----SSIYNGISTSGLDLNN 476

  Fly   484 GEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIV 522
            |.|.||....|.|...:|.....:|.|.|.:|||:|:|:
Yeast   477 GTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNII 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 162/559 (29%)
TCP1_gamma 7..524 CDD:239453 162/559 (29%)
CCT2NP_012124.1 TCP1_beta 5..520 CDD:239452 162/557 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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