DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and Mkks

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001135418.1 Gene:Mkks / 59030 MGIID:1891836 Length:570 Species:Mus musculus


Alignment Length:557 Identity:121/557 - (21%)
Similarity:216/557 - (38%) Gaps:93/557 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VIRTCLGPQAMLKMLMDPMGGIV-MTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVI 100
            ||.:|.||...||.|.:.:||.| .|:..:|:||.::|.||..|.:....:.......|......
Mouse    32 VIASCYGPSGRLKQLHNGLGGCVYTTSQSSALLRNLSVTHPVLKILTSSVQNHVSCFSDCGLFTA 96

  Fly   101 VLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVGHLQSQ---LSIQLDVKDKAKMADVV---- 158
            :|...::   |...:..:.|...|:..:..|.....:|:|:   ..|.:|.:.......:|    
Mouse    97 ILCCNLI---ENIQRLDLTPATAIKLNKYLLSLCTSYLKSEACSCRIPVDFRSTHTFLSLVHSIL 158

  Fly   159 ---KACVGTKFIGKWSDLAVKIALDA-VETVTLSENGRLEVDIKRYAKVEKIPGGAIEESCVLKG 219
               .||:.|:   |.:|....:.|.| :.|:..|...|:   :...:.:..:.|..:.:|.||.|
Mouse   159 TSKPACMLTR---KETDHIGALILKAFLLTIPESTEERM---VLGKSIIVPLKGQRVTDSTVLPG 217

  Fly   220 VMINKDVTHPKMRRLIENP-----RIVLLDCSLEYKKGESQTNVEIIGEQDFTRMLQIEE--EFV 277
            ::|  :.:..::|||:...     |:.|...||......:...|.:...|.......:|:  ...
Mouse   218 LLI--EASEVQLRRLLPTQKASGLRVALFCTSLSGDFSNAGEGVVVAHYQVSLENAVLEQLLNLG 280

  Fly   278 QRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTDNLRIARACGATIVNRTEELTE 342
            :|:..|.:    |||..:|.:....:.:..:..:.||.|:..|....:::..|||.:.....:..
Mouse   281 RRLVTDHV----DLVLCQKVIHPSLKQFFSERHVMAIDRVGVTLMESLSKVTGATPIGSLNPIVS 341

  Fly   343 KDVGTGAGLFEVK-----KIGDEYFTFVTECKEPKACTILLRGASKDILNETERNLQDALHVARN 402
            ...|:      ||     :.|.::| |.....|...||:||...:.....|.:...|.|:||.:.
Mouse   342 TTYGS------VKDVCSARFGSKHF-FHLLPNEATVCTLLLCSRNDTAWEELKLTCQTAMHVLQL 399

  Fly   403 LVLEPRLVAGGGAVEMAASQLLTRK---------------QVKGPYTAVA--HALEIIPRTLAQN 450
            .:.||.::.|||..|...:..:..|               |.|....|.|  .|||.:..:|..:
Mouse   400 TIKEPWVLLGGGCTETHLAAYVRHKVHHEAEAIVRDDGCTQAKLHVAAEAFCSALESVAGSLEHD 464

  Fly   451 CGANTIRA----LTALRAKHAS--HTGDGV--CAWGIDGESGEIVDMNVKNIWEPLA-------- 499
            .|...|..    |.:.:|..||  :..|.:  |..|:.....|:....:::.:.|.|        
Mouse   465 GGEILIDTKYGHLWSCQADSASVGNWSDTLSRCGCGLYNSQEELSWSVLRSTYHPFAPQTCLPQA 529

  Fly   500 --------------VKLQTYKTAVETAILLLRIDDIV 522
                          .||...:.|||||.|:|.:..::
Mouse   530 ALGSASNLTVDCFTAKLSGLQVAVETANLILDLSYVI 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 121/557 (22%)
TCP1_gamma 7..524 CDD:239453 121/557 (22%)
MkksNP_001135418.1 Cpn60_TCP1 29..569 CDD:395068 121/557 (22%)
Substrate-binding apical domain. /evidence=ECO:0000250|UniProtKB:Q9NPJ1 198..370 36/184 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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