DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT3 and Hsp60B

DIOPT Version :10

Sequence 1:NP_650572.2 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster


Alignment Length:599 Identity:132/599 - (22%)
Similarity:238/599 - (39%) Gaps:141/599 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITV--Q 74
            |::.:..||.:..:  |:....:||.:...:||:....::..|.....:|.||..:.|.|.:  |
  Fly    21 SKDVRFGSGVRAMM--IRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQ 83

  Fly    75 HP--AAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQ--QQIHPTVIIRAYREALEDIV 135
            |.  .||.:.::|...:|..|||||:..|||..:  |.|.|.|  ...:|..|.|....|: |:|
  Fly    84 HMNLGAKLVQDVADNTNESAGDGTTTATVLARAI--AKEGFNQITMGANPVEIRRGVMLAV-DVV 145

  Fly   136 GHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAV---ETVTLSENGRLE--- 194
            .....::|..::.:::.:....:.|...|: ||:    .:..|.|.|   .|:|:.:..||:   
  Fly   146 KDKLKEMSKAVETREEIQQVATLSANGDTE-IGR----LIGEATDKVGPRGTITVKDGKRLKDEL 205

  Fly   195 -----------------VDIKRYAKVE-----------KIPGGAIEESCVLKG-----------V 220
                             |:..:.:|||           ||.|    .|.::||           :
  Fly   206 NIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITG----LSQIVKGLEQSLRQRRPLI 266

  Fly   221 MINKDVTHPKMRRLIENP-RIVLLDCSLE------YKK---GE--SQTNVEIIGEQ-DFTRMLQI 272
            :|.:|::...:..|:.|. |:.|..|:::      ::|   |:  :.|...|.|:. ::::|.:.
  Fly   267 IIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAATGATIFGDDINYSKMEEA 331

  Fly   273 EEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTDNLRIARACGATIVNRT 337
            :.|.:.::...:|:....::...|.          |.|:..:|                 |....
  Fly   332 KLEDLGQVGEAVISKDSTMLLQGKP----------KTGLLEMR-----------------IQQIQ 369

  Fly   338 EELTEKDVGTGAGLFEVKKIGDEYFTFVTECKEPKACTIL-LRGASKDILNETERNLQDALHVAR 401
            :||.||.:..     |.:....:..:.:|     |...:| :.|.|:..:||.:..:.|||:..|
  Fly   370 DELAEKQIKP-----EQRDRLRQRLSALT-----KGVAVLHIGGGSEVEVNEKKDRVVDALNATR 424

  Fly   402 NLVLEPRLVAGGGAVEMAASQLLTRKQV------KGPYTAVAHALEIIPRTLAQNCGANTIRALT 460
             ..:|..:|.|||...:.....|...:.      || ...|.:||.:..:|:|||.|.:....: 
  Fly   425 -AAIEEGIVPGGGTAFLRCIPYLQELKTESADLQKG-VDIVCNALRMPCQTIAQNAGVDGPMVV- 486

  Fly   461 ALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILL---------L 516
               ||..:.:.|    :|.|....|...:..|.|.:|..|.......|...|.||         .
  Fly   487 ---AKVLNGSED----YGYDAMGDEYCRLVEKGIIDPTKVLRTAITDAAGVASLLSTTEVVITDS 544

  Fly   517 RIDDIVSGSKKRGG 530
            |.||::|.....||
  Fly   545 RNDDLLSKLSGAGG 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_650572.2 chap_CCT_gamma 7..528 CDD:274085 130/595 (22%)
Hsp60BNP_524925.1 GroEL 22..543 CDD:239460 125/581 (22%)

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