DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and mkks

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_021336215.1 Gene:mkks / 393134 ZFINID:ZDB-GENE-040426-757 Length:566 Species:Danio rerio


Alignment Length:585 Identity:115/585 - (19%)
Similarity:206/585 - (35%) Gaps:147/585 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IADVIRTCLGPQAMLKMLMDPMGG-IVMTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGTT 97
            :.:::.|..||...||.:.:.:|| ::.|:...|:|:.:.:..|..|.:....:.......|   
Zfish    29 LRNILSTAYGPTGRLKQIHNNVGGHVLTTSTSTALLKRLEMSEPLLKLISTALQHHTTRYSD--- 90

  Fly    98 SVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVGHLQ----------------------- 139
            |.:.:....|...|...:..:..:..|:.|:..:|....:|:                       
Zfish    91 SGLFMGIFTLTLIENTKKYGLRTSTAIKVYKHLVEQCNVYLKGDSCGCKVPVEFSSCDSLVALAH 155

  Fly   140 ----SQLSIQLDVKDKAKMADVVKACV---------GTKFIGKWSDLAVKIALDAVETVTLSENG 191
                |:.:..||.::..:::.::....         ||...|:              |||:.   
Zfish   156 SMITSKPACMLDSRETQQISSLITQAFLYSIPCNSSGTACFGR--------------TVTIG--- 203

  Fly   192 RLEVDIKRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKM------RRLIENP-RIVLLDCSLEY 249
                          |.|.::..|.|..|:::  ||  |:|      .||.:.| ::||...||  
Zfish   204 --------------IEGQSVNHSSVFPGLLL--DV--PEMLLPGDLERLGDGPFKVVLFGVSL-- 248

  Fly   250 KKGESQTNVEIIGE--QDFTRMLQIEEEFVQ---RICADIIAVKPDLVFTEKGVSDLAQHYLLKA 309
                 ..::..:|:  .:..|.|..|.:.:|   :|...::..|..|...:|.|..:.||||.:.
Zfish   249 -----SGDISEVGDVALEVHRGLNPERDLLQQLLKIGEQVVKDKVSLFACQKVVHPVLQHYLREH 308

  Fly   310 GITAIRRLRKTDNLRIARACGATIVNRTEELTEKDV-GTGAGLFEVKKIGDEYFTFVTECKEPKA 373
            .:..|.||........|:..||..|.....|...:. |..|||. .:..|.:....:...|....
Zfish   309 EVVVIERLGLALMEPFAKITGARAVASLFSLVPMEAYGLVAGLC-FQDCGSKKLLQLLSSKHAAI 372

  Fly   374 CTILLRGASKDILNETE---RNLQDALHVARNLVLEPRLVAGGGAVE-MAASQLLTRKQVKGPYT 434
            .|::|...::.:|.|.:   ...|.|.||.|..:.||..:.|||..| ..|:.:....|...|.|
Zfish   373 STMVLCHRNETMLEELKVCAMTCQRAEHVLRLTLREPYALLGGGCTETQLATHITHMNQSTAPTT 437

  Fly   435 AVAHALEIIPRTLAQNCGANTIRALTALRAKH------------------------ASHTGDGVC 475
            |.|..:......:|.....:::.|: ||..:|                        ..||    |
Zfish   438 AAALGISHSEFLMAVESFRSSLLAV-ALSLEHDGQDCLIDLTYGHRWVMDISSQTEVKHT----C 497

  Fly   476 AWGI--DGESGEIVDMNV----------------KNIWEPLAVKLQTYKTAVETAILLLRIDDIV 522
            ..|:  |..:.|...:|.                ..:.:..:.||.....|||.|.|:|.:..|:
Zfish   498 GCGLLEDRSNLEKTHLNTACQTFSPVFLENNDTQPKVLDSFSAKLNALNVAVEMASLVLDVKYII 562

  Fly   523  522
            Zfish   563  562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 115/585 (20%)
TCP1_gamma 7..524 CDD:239453 115/585 (20%)
mkksXP_021336215.1 Cpn60_TCP1 29..565 CDD:306598 115/585 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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