DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and CCT5

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster


Alignment Length:542 Identity:169/542 - (31%)
Similarity:287/542 - (52%) Gaps:32/542 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QPILVL--SQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAIL 68
            :|.::|  .:..||.:|......:|.|.:.||..::|.|||:.:.|:::.|.|.:.:||||..|:
  Fly    15 RPFIILRDQERQKRITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIM 79

  Fly    69 REITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALED 133
            :.:.|.|..||.|::::::||:|:|||||.|:||||.:|..||..:.:.|||..|...:..|.:.
  Fly    80 KLMEVDHEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQC 144

  Fly   134 IVGHLQS-QLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLEVDI 197
            .:..|.: .....:|.|:|..:..:....:|:|.:.|......::|:|||..|...|...:..::
  Fly   145 AIKQLDAIAQPFPVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVADIEKKDVNFEL 209

  Fly   198 KRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQTNVEIIG 262
               .|:|...||.:|:|.::|||:::|.::|.:|.:.:.|.::.:|.|..|..|.:::..:::..
  Fly   210 ---IKIETKVGGRMEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTS 271

  Fly   263 EQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTDNLRIAR 327
            .:|:..:.:.|:|...::...:......|...:.|..|.|.|.||:..:.|:|.:...:...||.
  Fly   272 AEDYRALREYEQEKFTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAI 336

  Fly   328 ACGATIVNRTEELTEKDVGTGAGLFEVKKIG--DEYFTFVTECKEPKACTILLRGASKDILNETE 390
            |.|..||.|.||||.:.:|. |||......|  .:....:.|||..||.||.|||.:..|:.|.:
  Fly   337 ATGGRIVPRFEELTPEKLGV-AGLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEAK 400

  Fly   391 RNLQDALHVARNLVLEPRLVAGGGAVEMA--------ASQLLTRKQVKGPYTAVAHALEIIPRTL 447
            |::.||:.|.|:||.:.|:|.||||.|::        |.||.|.:|.  .:.|.:.|||.||..|
  Fly   401 RSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQY--AFRAFSVALESIPLAL 463

  Fly   448 AQNCGANTIRALTALRAKHASHTGDGVCAWGID----GESGEIVDMNVKNIWEPLAVKLQTYKTA 508
            |:|.|.:.|..|:.|:|:..:.....:   |:|    |:|    ||...|:.|.|..|.|....:
  Fly   464 AENSGLHPIETLSELKARQVAEKKSSL---GVDCMLSGDS----DMKSHNVVESLHSKKQQILLS 521

  Fly   509 VETAILLLRIDDIVSGSKKRGG 530
            .:...::|:|||:  .||..||
  Fly   522 TQLVKMILKIDDV--RSKNEGG 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 167/537 (31%)
TCP1_gamma 7..524 CDD:239453 165/533 (31%)
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 165/535 (31%)
Cpn60_TCP1 45..534 CDD:278544 157/501 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453426
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100235
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.750

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