DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and cct5

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_997778.1 Gene:cct5 / 322258 ZFINID:ZDB-GENE-030131-977 Length:541 Species:Danio rerio


Alignment Length:547 Identity:185/547 - (33%)
Similarity:296/547 - (54%) Gaps:37/547 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GQQPILVLSQNTK-RESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAI 67
            |:..|::..|:.| |.:|.:....:|.|.||:|:.:||.|||..:.||::|..|.:.:||||..|
Zfish    13 GRPFIIIKDQDKKSRLTGLEALKSHILAAKAVANTLRTSLGPNGLDKMMVDKDGEVTVTNDGATI 77

  Fly    68 LREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALE 132
            |..:.|.|..||.|:|::::||:|:|||||.|:||||.:|..||..|.:.|||..|...|.:|.:
Zfish    78 LSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIRIADGYDQAAK 142

  Fly   133 ------DIVGHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENG 191
                  |.:|.     |..:|..:...:.......:|:|.|.:......:||::|:  :|:::..
Zfish   143 IAIEQLDKIGD-----SFPVDPNNTESLVQTAMTTLGSKVINRCHRQMAEIAVNAI--LTVADME 200

  Fly   192 RLEVDIKRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQT 256
            |.:||.: ..|||...||.:|::.::|||:::|:.:||:|.:::::.:|.:|.|..|..|.:::.
Zfish   201 RKDVDFE-LIKVEGKVGGKLEDTQLIKGVIVDKEFSHPQMPKVLKDTKIAILTCPFEPPKPKTKH 264

  Fly   257 NVEIIGEQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTD 321
            .:::...:|:..:.:.|::..|.:...:.....:|...:.|..|.|.|.||:..:.|||.:...:
Zfish   265 KLDVTSVEDYKALQKYEKDKFQEMIRQVKENGANLAICQWGFDDEANHLLLQNELPAIRWVGGPE 329

  Fly   322 NLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKI----GDEYFTFVTECKEPKACTILLRGAS 382
            ...||.|.|..||.|..|||.:.:|| |||  ||:|    ..:....:.|||..:|.||.:||.:
Zfish   330 IELIAIATGGRIVPRFCELTPEKLGT-AGL--VKEICFGTTKDRMLVIEECKNSRAVTIFIRGGN 391

  Fly   383 KDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTRKQVKGP------YTAVAHALE 441
            |.|:.|.:|.|.|||.|.||||.:.|:|.||||.|:|.:..:.....|.|      ..|.|.|||
Zfish   392 KMIIEEAKRALHDALCVIRNLVRDNRIVYGGGASEIACALAVNEAADKCPSLEQYAMRAFADALE 456

  Fly   442 IIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYK 506
            :||..||:|.|.|.|:.:|.:||:.......   |.|||.......||..:::.|.|..|.|...
Zfish   457 VIPMALAENSGLNPIQTMTEVRARQVKENNS---ALGIDCLHLSTNDMKQQHVIETLIGKKQQIS 518

  Fly   507 TAVETAILLLRIDDIVSGSKKRGGNEP 533
            .|.:...::|:||||      ||..||
Zfish   519 LATQVVKMILKIDDI------RGPGEP 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 180/537 (34%)
TCP1_gamma 7..524 CDD:239453 180/533 (34%)
cct5NP_997778.1 TCP1_epsilon 10..535 CDD:239455 181/541 (33%)
Cpn60_TCP1 44..533 CDD:278544 169/502 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100235
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.720

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