DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and CCT2

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster


Alignment Length:563 Identity:167/563 - (29%)
Similarity:274/563 - (48%) Gaps:83/563 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PILVLSQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDP---MGGIVMTNDGNAIL 68
            |:.||....:.|.....:|.:.....||.|::::.|||:.|.|:|:..   .|.:.:||||..||
  Fly     7 PVRVLKNEAQEEKAEMARLSSFIGAIAIGDLVKSTLGPKGMDKILVATGRNAGHVEVTNDGATIL 71

  Fly    69 REITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYRE---- 129
            |.:.|.:||||.:::::|.||||||||||||.|||.|:|..||..::|::||.:|:..:|:    
  Fly    72 RAVGVDNPAAKILVDMSRVQDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQV 136

  Fly   130 ALEDIVGHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLE 194
            |||.:....|...|  .|.|.:..:.::.:..:.:|.:.:..|....:|:|||  :.|..:|.| 
  Fly   137 ALEALTAAAQDNSS--SDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAV--MRLKGSGEL- 196

  Fly   195 VDIKRYAKVEKIPGGAIEESCVLKGVMINKDV-THPKMRRLIENPRIVLLDCSLEYKKGESQTNV 258
                :..::.|..||.:.:|.:.:|.:::|.. .|...|  |||.||::.:..::..|      :
  Fly   197 ----KSIQIIKKSGGTLGDSFLDEGFLLDKKPGVHQPQR--IENARILIANTPMDTDK------I 249

  Fly   259 EIIGEQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEK-----GVSDLAQH-----------YLL 307
            ::.|..               |..|.:|...||...||     .|..:.:|           |..
  Fly   250 KVFGSS---------------IKVDSLAKIADLEMAEKEKMKEKVDKILKHKCNVFINRQLIYNY 299

  Fly   308 KAGITAIRRLRKTDNL------RIARACGATIVNRTE-----ELTEKDVGTGAGLFEVKKIGDEY 361
            ...:.|..|:...::.      |:|...|..||:..|     :|.|.||      .|...||::.
  Fly   300 PEQLFADARVMSIEHADFDGIERLAYCTGGEIVSTFENPSLVKLGECDV------IEQVMIGEDT 358

  Fly   362 FTFVTECKEPKACTILLRGASKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTR 426
            ....:..|..:||||::|||::.||:|.:|:|.|||.|....|.|.|::.|||..|...:..:.:
  Fly   359 LLRFSGVKLGEACTIVIRGATQQILDEADRSLHDALCVLAATVKESRIIFGGGCSEALMATAVLK 423

  Fly   427 KQVKGP------YTAVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGE 485
            |..:.|      ..|.|.||..:|..:|.|.|.::.:.::.|||.||    .|....|:|.|.|:
  Fly   424 KAAETPGKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGHA----QGKQTLGLDMELGK 484

  Fly   486 IVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVSGSKKR 528
            :.|:....|.|..|||.|...:|.|.|.::||:|:|:..:.:|
  Fly   485 VADVRELGITESFAVKRQVLMSASEAAEMILRVDNIIRCAPRR 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 166/561 (30%)
TCP1_gamma 7..524 CDD:239453 166/557 (30%)
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 167/563 (30%)
TCP1_beta 10..527 CDD:239452 165/558 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453445
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D38420at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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