DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and cct3

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_775357.1 Gene:cct3 / 192327 ZFINID:ZDB-GENE-020419-5 Length:543 Species:Danio rerio


Alignment Length:545 Identity:383/545 - (70%)
Similarity:453/545 - (83%) Gaps:12/545 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFGGQQPILVLSQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGN 65
            |.|  :|:||||||.|||||||||:.||.|.|.|||:|||||||:||:|||:|||||||||||||
Zfish     1 MMG--RPVLVLSQNIKRESGRKVQIGNISAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGN 63

  Fly    66 AILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREA 130
            ||||||.||||||||||||:|||||||||||||||:||||||:.||.||:||:||||:|.|||:|
Zfish    64 AILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEQFLEQQMHPTVVIGAYRQA 128

  Fly   131 LEDIVGHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLEV 195
            |:|::..|: .:|..:||.::..|..::.:.:.||.:.:||.||..||||||.||.|.||||.|:
Zfish   129 LDDMLNILK-DISTPVDVSNRDMMLKIINSAINTKALSRWSTLACNIALDAVRTVELDENGREEI 192

  Fly   196 DIKRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQTNVEI 260
            |||:||||||:|||.||:||||:|||:|||||||:|||||:||||||||||||||||||||::||
Zfish   193 DIKKYAKVEKVPGGIIEDSCVLRGVMVNKDVTHPRMRRLIKNPRIVLLDCSLEYKKGESQTDIEI 257

  Fly   261 IGEQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTDNLRI 325
            ..|:||.|:||:|||:||:||.|||.:||||:|||||:||||||||:||.||||||:|||||.||
Zfish   258 AREEDFARILQMEEEYVQQICEDIIRLKPDLIFTEKGISDLAQHYLMKANITAIRRIRKTDNNRI 322

  Fly   326 ARACGATIVNRTEELTEKDVGTGAGLFEVKKIGDEYFTFVTECKEPKACTILLRGASKDILNETE 390
            ||||||.|.:||:||||.|||||.||||||||||||||||||||:|||||||||||||:||.|.|
Zfish   323 ARACGARIASRTDELTENDVGTGTGLFEVKKIGDEYFTFVTECKDPKACTILLRGASKEILAEVE 387

  Fly   391 RNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTRKQ------VKGPYTAVAHALEIIPRTLAQ 449
            ||||||:.|.||::|:|.|:.|||||||..|..||.:.      .:.||.|||.|||::||||.|
Zfish   388 RNLQDAMQVCRNVLLDPYLLPGGGAVEMEVSHRLTERSRAMTGVEQWPYRAVAQALEVVPRTLIQ 452

  Fly   450 NCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAIL 514
            ||||:.||.||:||||   ||.:|..:||::||:|.:.||....||||||||.||||||||||||
Zfish   453 NCGASAIRVLTSLRAK---HTQEGNSSWGVNGETGTLADMEQLGIWEPLAVKAQTYKTAVETAIL 514

  Fly   515 LLRIDDIVSGSKKRGGNEPTNPAAM 539
            ||||||||||.||:|..|.|..|.|
Zfish   515 LLRIDDIVSGHKKKGDGEQTGGAPM 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 375/526 (71%)
TCP1_gamma 7..524 CDD:239453 372/522 (71%)
cct3NP_775357.1 chap_CCT_gamma 5..528 CDD:274085 375/526 (71%)
TCP1_gamma 5..524 CDD:239453 372/522 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573304
Domainoid 1 1.000 707 1.000 Domainoid score I119
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4373
Inparanoid 1 1.050 760 1.000 Inparanoid score I532
OMA 1 1.010 - - QHG53994
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 1 1.000 - - FOG0004601
OrthoInspector 1 1.000 - - oto41446
orthoMCL 1 0.900 - - OOG6_100235
Panther 1 1.100 - - LDO PTHR11353
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1488
SonicParanoid 1 1.000 - - X3218
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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