DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and cct2

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_958863.1 Gene:cct2 / 192326 ZFINID:ZDB-GENE-020419-6 Length:535 Species:Danio rerio


Alignment Length:555 Identity:165/555 - (29%)
Similarity:272/555 - (49%) Gaps:68/555 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PILVLSQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGG----IVMTNDGNAI 67
            |:.:.......|.....:|.:.....||.|::::.|||:.|.|:|:.  ||    :.:||||..|
Zfish     8 PVSIFKHGADEEKAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLG--GGRESTVTVTNDGATI 70

  Fly    68 LREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREAL- 131
            |:.|.|.:||||.::::::.||:|||||||||.|||.|:|..||..:.::|||.:||..:|:|. 
Zfish    71 LKAIGVDNPAAKVLVDMSKVQDDEVGDGTTSVTVLAAELLREAELLIAKKIHPQIIIAGWRKATQ 135

  Fly   132 -------EDIVGHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSE 189
                   |..|.|...::..|.|      :.::.:..:.:|.:....|...|:|:.||  :.|..
Zfish   136 AARDALREAAVDHGSDEVKFQED------LLNISRTTLSSKLLTHHKDHFAKLAVQAV--MRLRG 192

  Fly   190 NGRLEVDIKRYAKVEKIPGGAIEESCVLKGVMINK--DVTHPKMRRLIENPRIVLLDCSLEYKKG 252
            :|.||.    ...::|: ||::.:|.:.:|.:::|  .|..||.   |||..|::.:..::..| 
Zfish   193 SGNLEA----IHLIKKL-GGSLTDSYLDEGFLLDKRIGVNQPKR---IENANILIANTGMDTDK- 248

  Fly   253 ESQTNVEIIGEQ---DFT-RMLQIE-------EEFVQRICADII--AVKPDLVFTEKGVSDLAQH 304
                 ::|.|.:   |.| ::.:||       :|.|:||....|  .:...|::      :..:.
Zfish   249 -----IKIFGSRVRVDSTAKVAEIETAEKEKMKEKVERILKHGINCFINRQLIY------NYPEQ 302

  Fly   305 YLLKAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIGDEYFTFVTECK 369
            ....||:.||.....|...|:|...|..|.:..:......:| ...|.|...||::.....:...
Zfish   303 LFAAAGVMAIEHADFTGVERLALVTGGEITSTFDHPELVKLG-HCKLIEEVMIGEDTLIHFSGVS 366

  Fly   370 EPKACTILLRGASKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEM----AASQLLTRKQVK 430
            ..:||||:||||::.||:|.||:|.|||.|....|.|.|.|.|||..||    |.|.|......|
Zfish   367 MGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKETRTVYGGGCSEMLMAKAVSDLANHTPGK 431

  Fly   431 GPYT--AVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKN 493
            ....  :.|.||.::|..:|.|.|.::...::.|||.|.    |....:|:|...|.:.||:...
Zfish   432 EAVAMESFAKALMMLPTIIADNAGYDSAELVSQLRAAHQ----DNKNTFGLDMTQGCVGDMSALG 492

  Fly   494 IWEPLAVKLQTYKTAVETAILLLRIDDIVSGSKKR 528
            :.|...||.|...:|.|.|.::||:|:|:..:.::
Zfish   493 VTESFQVKRQVLLSAAEAAEMILRVDNIIKAAPRK 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 165/553 (30%)
TCP1_gamma 7..524 CDD:239453 165/549 (30%)
cct2NP_958863.1 PTZ00212 7..530 CDD:185514 165/555 (30%)
TCP1_beta 11..527 CDD:239452 164/550 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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