DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and cct7

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_775355.1 Gene:cct7 / 192324 ZFINID:ZDB-GENE-020419-7 Length:547 Species:Danio rerio


Alignment Length:557 Identity:179/557 - (32%)
Similarity:285/557 - (51%) Gaps:43/557 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PILVLSQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREI 71
            |:::|.:.|....|....:.||.|.:.:|:.:||.|||:.|.|:::|..|...::|||..||:.:
Zfish     5 PVILLKEGTDTSQGVPQLVSNINACQVVAEAVRTTLGPRGMDKLVVDNRGKATISNDGATILKLL 69

  Fly    72 TVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVG 136
            .|.|||||::::|||:||.|||||||||.:||.|.|...:|::::.:||..||||:|.|.:..|.
Zfish    70 DVVHPAAKTLVDIARSQDAEVGDGTTSVTLLAAEFLKQLKPYVEEGLHPQTIIRAFRIATQLAVK 134

  Fly   137 HLQSQLSIQLDVKDKAKMADVVKACVGT----KFIGKWSDLAVKIALDAV----ETVTLSENGRL 193
            .:: ::::.:...||.:...:::.|..|    |.|....|...|:.:|||    :.:.|...|  
Zfish   135 KIK-EIAVTIKKDDKQEQRRLLEKCAATALNSKLIAGQKDFFSKMVVDAVMMLDDLLPLKMIG-- 196

  Fly   194 EVDIKRYAKVEKIPGGAIEESCVLKGVMINKDVTH------PKMRRLIENPRIVLLDCSLEYKKG 252
                     |:|:.|||:|||.::.||...|..::      ||.   ..||:|.||:..||.|..
Zfish   197 ---------VKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKR---YMNPKIALLNIELELKAE 249

  Fly   253 ESQTNVEIIGEQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRL 317
            :....|.:...:|:..::..|...:......|......:|.::..:.|:|..|.....:....|:
Zfish   250 KDNAEVRVNSMEDYQAIVDAEWNILYDKLEKIHKSGAKVVLSKLPIGDVATQYFAYRNLFCAARV 314

  Fly   318 RKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIGDEYFTFVTECKEPKACTILLRGAS 382
            .:.:..|...|||.:|......||: ||.....|||..::|.|.:.|...|.:.|.|||:|||.:
Zfish   315 VEENLKRTMMACGGSIQTSVGSLTD-DVLGQCELFEEVQVGGERYNFFKGCPKAKTCTIILRGGA 378

  Fly   383 KDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLT--RKQVKGPYT----AVAHALE 441
            :..:.||:|:|.||:.:.|..:....:||||||:||..|:.|.  .:.:.|...    |.|.|||
Zfish   379 EQFMEETDRSLHDAIMIVRRAIKNDSIVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALE 443

  Fly   442 IIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYK 506
            ||||.|..|.|.:....|..||||||    .|...:|:|..:.:|.|.....:|||..|::....
Zfish   444 IIPRQLCDNAGFDATNILNKLRAKHA----QGGMWYGVDVNNEDIADNFQACVWEPSIVRINALT 504

  Fly   507 TAVETAILLLRIDDIVSGSKKRGGNEPTNPAAMAQGQ 543
            .|.|.|.|:|.:|:.:   |....:....|||..:|:
Zfish   505 AASEAACLILSVDETI---KNPRSSVDGPPAAAGRGR 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 175/540 (32%)
TCP1_gamma 7..524 CDD:239453 174/536 (32%)
cct7NP_775355.1 chap_CCT_eta 4..525 CDD:274086 175/542 (32%)
TCP1_eta 5..525 CDD:239456 175/542 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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