DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and cct-8

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_500035.3 Gene:cct-8 / 176928 WormBaseID:WBGene00021934 Length:548 Species:Caenorhabditis elegans


Alignment Length:537 Identity:141/537 - (26%)
Similarity:249/537 - (46%) Gaps:41/537 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIARTQDEE 91
            ||:|...:|..||:..||..|.||:::.:..:.:|||...||:|:.:|||||:.:|.....|:::
 Worm    31 NIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARIIIMATEMQEKQ 95

  Fly    92 VGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVGHLQSQLSIQ-LDVKDKAKMA 155
            :||.|.:|::||..:|..|...:...:.|..:...|.:|.|..:..|.:.:..: .|:|:..::.
 Worm    96 IGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVKEATDMKNIEEVR 160

  Fly   156 DVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLEVDIKRYAKVEKIPGGAIEESCVLKGV 220
            ..:::.:.:|.... .|:...:...|..|...:.:....||   ..::.||.|..:..|.|:.| 
 Worm   161 QYIRSAITSKQYDN-EDIIADLVAKACVTTCPANSFNFNVD---NIRICKIIGSGVHTSTVMNG- 220

  Fly   221 MINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQTNVEIIGEQDFTRMLQIEEEFVQRICADII 285
            |:.|.....::|. ..:.||.:..|..:..:.|::..|.|....:.....:.||..|:.....|.
 Worm   221 MVFKRGAEGEIRE-ARDARIAVYTCPFDLTQTETKGTVLIENADELRNFSKGEEAEVEEQVKAIA 284

  Fly   286 AVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTDNLRIARACGA-----------TIVNRTEE 339
            .....:|.......|:..|:|.|..|.|:|...|.|..|:.|..||           .::...:.
 Worm   285 DNGVKVVVAAGKFGDMYLHFLNKYKIMAVRLTSKFDLRRLCRTVGAQPQARICAPAVNLLGHCDS 349

  Fly   340 LTEKDVGTGAGLFEVKKIGDE-YFTFVTECKEPKACTILLRGASKDILNETERNLQDALHVARNL 403
            :.            |::|||| ...|..:.:..|..||::||:|:..:::.||.:.||::..:.|
 Worm   350 VA------------VQEIGDENVVVFDKKSETGKVATIIIRGSSQSRIDDVERAVDDAVNTYKAL 402

  Fly   404 VLEPRLVAGGGAVEMAASQLLTRKQVKGP------YTAVAHALEIIPRTLAQNCGANTIRALTAL 462
            ..:.:|:||.||||:..::.:.....|.|      ....|||||.:|:.:|:|.|..|...||.|
 Worm   403 TKDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTETLTKL 467

  Fly   463 RAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVSGSKK 527
            .|:|.:    |....|||....|.:|..|.||::..|.|....|.|.:.|..:|::|.|:...:.
 Worm   468 YAEHVA----GKKNAGIDIWKRETMDAVVNNIFDLYAGKRLAIKLATDAASTILKVDQIIMSKQA 528

  Fly   528 RGGNEPTNPAAMAQGQE 544
            .||.:|..|.|..:..:
 Worm   529 TGGPKPRGPKAQDEDDD 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 136/519 (26%)
TCP1_gamma 7..524 CDD:239453 136/515 (26%)
cct-8NP_500035.3 TCP1_theta 19..526 CDD:239457 136/516 (26%)
Cpn60_TCP1 38..526 CDD:278544 133/509 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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