DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and cct-6

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_741153.1 Gene:cct-6 / 175819 WormBaseID:WBGene00000381 Length:539 Species:Caenorhabditis elegans


Alignment Length:534 Identity:158/534 - (29%)
Similarity:276/534 - (51%) Gaps:40/534 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NTKRESGR-KVQLE-NIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHP 76
            |.|.|..| ...|| ||...:.:.||:|:.|||:..||||:...|.|.:|.|||.:|.|:.:|||
 Worm     8 NPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72

  Fly    77 AAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYR----EALEDIVGH 137
            .|..:.:.:..||:..||||||.::|.||:|..||..:.:.:||.::...:.    :.|| ::..
 Worm    73 TASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLE-LLEK 136

  Fly   138 LQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLEVDIKRYAK 202
            .:.:..::.|:     :.:|.:..:.||...|.:|...:..:|||  :.:..:|. |.|:....|
 Worm   137 FKKEAPVERDL-----LVEVCRTALRTKLHQKLADHITECVVDAV--LAIRRDGE-EPDLHMVEK 193

  Fly   203 VEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQTNVEIIGEQDFT 267
            :|......::.:.| :|::::....||.|.|.:::..|:..:.||||:|.|..:.:.....::..
 Worm   194 MEMHHDSDMDTTLV-RGLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEVNSGLFYKTAKERE 257

  Fly   268 RMLQIEEEFVQRICADIIAVK-------PD------LVFTEKGVSDLAQHYLLKAGITAIRRLRK 319
            .:|..|.||:.|....||.:|       ||      :|..:||:...:...|...||.|:||.::
 Worm   258 ALLAAEREFITRRVHKIIELKKKVIDNSPDGKNKGFVVINQKGIDPPSLDLLASEGILALRRAKR 322

  Fly   320 TDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIGDEYFTFVTECKEPKACTILLRGASKD 384
            .:..|:..|.|...||..::||.:|:| .|||.....:|:|.:||:.||:.||:.|:|::|.:|.
 Worm   323 RNMERLQLAVGGEAVNSVDDLTPEDLG-WAGLVYEHSLGEEKYTFIEECRAPKSVTLLIKGPNKH 386

  Fly   385 ILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTR--KQVKG----PYTAVAHALEII 443
            .:.:.:..:.|.|....|.:::..::.|..|.|:||..:|.:  :.:||    ...|.|.||.:|
 Worm   387 TITQIKDAIHDGLRAVFNTIVDKAVLPGAAAFEIAAYVMLKKDVENLKGRAKLGAEAFAQALLVI 451

  Fly   444 PRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTA 508
            |:|||.|.|.:....|..|..:..:...|  .|.|:|.|:|..|:  .:.||:.:.||..:..:|
 Worm   452 PKTLAVNGGYDAQETLVKLIEEKTAAGPD--IAVGLDLETGGAVE--PQGIWDNVTVKKNSISSA 512

  Fly   509 VETAILLLRIDDIV 522
            ...|..||.:|:::
 Worm   513 TVLACNLLLVDEVM 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 158/534 (30%)
TCP1_gamma 7..524 CDD:239453 158/534 (30%)
cct-6NP_741153.1 chap_CCT_zeta 3..534 CDD:274088 158/534 (30%)
TCP1_zeta 7..530 CDD:239458 158/534 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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