DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and cct-5

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_741117.1 Gene:cct-5 / 175588 WormBaseID:WBGene00000380 Length:542 Species:Caenorhabditis elegans


Alignment Length:547 Identity:178/547 - (32%)
Similarity:299/547 - (54%) Gaps:42/547 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QPILVL--SQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAIL 68
            ||.:|:  .:|.||.:|.:....:|.|.:|:|:.:||.|||:.:.|||:.|.|.:.:||||..|:
 Worm    15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIM 79

  Fly    69 REITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAY----RE 129
            .::.|||..||.|:|::::||.|:|||||.|:||||.:|..||..:.:.|||..|...:    ::
 Worm    80 EKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKK 144

  Fly   130 ALEDIVGHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLE 194
            |||.:     ..:|.:..|:::.::.:..:..:|:|.:.:......:||:|||.:|...|:..:.
 Worm   145 ALETL-----DSISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVN 204

  Fly   195 VD-IKRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQTNV 258
            .: ||...||    ||.:|::.::||::|:|.::||:|.:.::|.::.:|.|..|..|.:::..:
 Worm   205 FEMIKMEGKV----GGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKL 265

  Fly   259 EIIGEQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTDNL 323
            :|...:||..:...|.|..:.:...:......|...:.|..|.|.|.|....:.|:|.:...:..
 Worm   266 DITSTEDFKALRDYERETFETMIRQVKESGATLAICQWGFDDEANHLLQANDLPAVRWVGGPEIE 330

  Fly   324 RIARACGATIVNRTEELTEKDVGTGAGLFEVKKIGDEYFTF---------VTECKEPKACTILLR 379
            .:|.|..|.||.|..||:::.:|| |||  |::|     ||         :.:|...||.||.:|
 Worm   331 LLAIATNARIVPRFSELSKEKLGT-AGL--VREI-----TFGAAKDRMLSIEQCPNNKAVTIFVR 387

  Fly   380 GASKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTRK--QVKG----PYTAVAH 438
            |.:|.|::|.:|.|.|||.|.||||.:.|:|.|||:.|:||:..:.::  ::.|    .:.|.|.
 Worm   388 GGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFAD 452

  Fly   439 ALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQ 503
            |||.||..||:|.|...|.||:.|:||...   .|..:.|||.......||..:.:.|.|..|.:
 Worm   453 ALESIPMALAENSGLAPIDALSDLKAKQIE---TGKSSLGIDAVFAGTNDMKEQKVIETLLSKRE 514

  Fly   504 TYKTAVETAILLLRIDDIVSGSKKRGG 530
            ....|.:...::|:|||:.....:|.|
 Worm   515 QISLATQVVRMILKIDDVRVPDDERMG 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 175/542 (32%)
TCP1_gamma 7..524 CDD:239453 175/538 (33%)
cct-5NP_741117.1 TCP1_epsilon 11..534 CDD:239455 176/538 (33%)
Cpn60_TCP1 45..532 CDD:278544 165/506 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100235
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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