DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and VKORC1L1

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001271271.1 Gene:VKORC1L1 / 154807 HGNCID:21492 Length:177 Species:Homo sapiens


Alignment Length:46 Identity:11/46 - (23%)
Similarity:16/46 - (34%) Gaps:22/46 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 IRALTALRAKHAS-------------HTGDGV---------CAWGI 479
            ::...||.::|.|             |.|.||         ||.|:
Human    56 VKCSAALASRHDSKRCGGFDPHDVLHHVGRGVPVPGLHSVLCAEGV 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 11/46 (24%)
TCP1_gamma 7..524 CDD:239453 11/46 (24%)
VKORC1L1NP_001271271.1 VKOR 18..>65 CDD:321633 2/8 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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