DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and Cct6b

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_033969.2 Gene:Cct6b / 12467 MGIID:1329013 Length:531 Species:Mus musculus


Alignment Length:532 Identity:152/532 - (28%)
Similarity:273/532 - (51%) Gaps:68/532 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIARTQDEE 91
            ||.|.:.:.||:|..|||:..||||:...|.|.:|.|||.:|.|:.:|||.|..:.::|..||..
Mouse    23 NICAARGLQDVLRPTLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASIIAKVAAAQDHV 87

  Fly    92 VGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAY----REALEDIVGHLQSQLSIQLDVKDKA 152
            .||||||.:::.||:|..|:.::.:.:||.:|...:    .:|||     :..::.:|.::| :.
Mouse    88 TGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFDVAKTKALE-----VLDEIKVQKEMK-RE 146

  Fly   153 KMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLEVDIKRYAKVEKIPGGAIE----- 212
            .:.||.:..:.||...:.:|:..:..:|:|            :.|:|       ||..|:     
Mouse   147 ILLDVARTSLQTKVHAELADILTEAVVDSV------------LAIRR-------PGVPIDLFMVE 192

  Fly   213 ----------ESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQTNVEIIGEQDFT 267
                      ::.:::|::::....||:||:.:.:..|:..:.||||:|.|..:.......::..
Mouse   193 IVEMRHKSETDTQLIRGLVLDHGARHPRMRKQVRDAYILTCNVSLEYEKTEVSSGFFYKTVEEKE 257

  Fly   268 RMLQIEEEFV-----------QRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTD 321
            ::::.|.:|:           |::||:  :.|..:|..:||:..::...|.|..|.|:||.::.:
Mouse   258 KLVKAERKFIEDRVQKIIDLKQKVCAE--SNKGFVVINQKGIDPVSLEMLAKHNIVALRRAKRRN 320

  Fly   322 NLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIGDEYFTFVTECKEPKACTILLRGASKDIL 386
            ..|:..|||...||..|.|:|:.:|....:||. .:|:|.|||:.:|..|.:.|:|::|.:|..|
Mouse   321 LERLTLACGGLAVNSFEGLSEECLGHAGLVFEY-ALGEEKFTFIEDCVNPLSVTLLVKGPNKHTL 384

  Fly   387 NETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLT--RKQVKG----PYTAVAHALEIIPR 445
            .:.:..|:|.|...:|.:.:..:|.|.||||:|.::.|.  :.:|:|    ...|.|.||.|||:
Mouse   385 IQIKDALRDGLRAVKNAIEDGCVVPGAGAVEVAIAEALVNYKHRVQGRVRLGIQAFADALLIIPK 449

  Fly   446 TLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVE 510
            .||||.|.:....|..::.|||    :.....|||..:||.:......||:...||.....:...
Mouse   450 VLAQNSGYDLQETLIKIQTKHA----ESKELLGIDLNTGEPMAAAEAGIWDNYCVKKHLLHSCTV 510

  Fly   511 TAILLLRIDDIV 522
            .|..:|.:|:|:
Mouse   511 IATNILLVDEIM 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 152/532 (29%)
TCP1_gamma 7..524 CDD:239453 152/532 (29%)
Cct6bNP_033969.2 chap_CCT_zeta 3..530 CDD:274088 152/532 (29%)
TCP1_zeta 8..526 CDD:239458 152/532 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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