DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and Cct5

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_031663.1 Gene:Cct5 / 12465 MGIID:107185 Length:541 Species:Mus musculus


Alignment Length:539 Identity:178/539 - (33%)
Similarity:299/539 - (55%) Gaps:24/539 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QPILVLSQNTK--RESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAIL 68
            :|.|::....:  |..|.:....:|.|.||:|:.:||.|||..:.||::|..|.:.:||||..||
Mouse    14 RPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATIL 78

  Fly    69 REITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALED 133
            ..:.|.|..||.|:|::::||:|:|||||.|:||||.:|..||..|.:.|||..|...|.:|...
Mouse    79 SMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARI 143

  Fly   134 IVGHLQSQLS--IQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLEVD 196
            .:.|| .::|  :.:|:.:...:....|..:|:|.|........:||::||  :|:::..|.:||
Mouse   144 AIQHL-DKISDKVLVDINNPEPLIQTAKTTLGSKVINSCHRQMAEIAVNAV--LTVADMERRDVD 205

  Fly   197 IKRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQTNVEII 261
            .: ..|||...||.:|::.::|||:::||.:||:|.:.:.:.:|.:|.|..|..|.:::..::::
Mouse   206 FE-LIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVVDAKIAILTCPFEPPKPKTKHKLDVM 269

  Fly   262 GEQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTDNLRIA 326
            ..:|:..:.:.|:|..:.:...|.....:|...:.|..|.|.|.||:.|:.|:|.:...:...||
Mouse   270 SVEDYKALQKYEKEKFEEMIKQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEIELIA 334

  Fly   327 RACGATIVNRTEELTEKDVGTGAGLFEVKKIG--DEYFTFVTECKEPKACTILLRGASKDILNET 389
            .|.|..||.|..|||.:.:|. ||:.:....|  .:....:.:||..:|.||.:||.:|.|:.|.
Mouse   335 IATGGRIVPRFSELTSEKLGF-AGVVQEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEA 398

  Fly   390 ERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTRKQVKGP------YTAVAHALEIIPRTLA 448
            :|:|.|||.|.|||:.:.|:|.||||.|::.:..::::..|.|      ..|.|.|||:||..|:
Mouse   399 KRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALS 463

  Fly   449 QNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAI 513
            :|.|.|.|:.:|.:||:....:..   |.|||.......||..:::.|.|..|.|....|.:...
Mouse   464 ENSGMNPIQTMTEVRARQVKESNP---ALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVR 525

  Fly   514 LLLRIDDIVSGSKKRGGNE 532
            ::|:||||    :|.|.:|
Mouse   526 MILKIDDI----RKPGESE 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 175/532 (33%)
TCP1_gamma 7..524 CDD:239453 175/528 (33%)
Cct5NP_031663.1 TCP1_epsilon 10..535 CDD:239455 175/532 (33%)
Cpn60_TCP1 44..533 CDD:278544 165/496 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100235
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.720

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