DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT3 and Cct4

DIOPT Version :9

Sequence 1:NP_001189236.1 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_033967.1 Gene:Cct4 / 12464 MGIID:104689 Length:539 Species:Mus musculus


Alignment Length:519 Identity:162/519 - (31%)
Similarity:283/519 - (54%) Gaps:20/519 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSM 81
            |:...:::..||.|.||:||.|||.|||:.|.||:.|..|.:.:||||..||:::.|.||||:.:
Mouse    27 RDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARML 91

  Fly    82 IEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVGHLQSQLSIQL 146
            :|:::.||.|.|||||||:::||.:|.:....||:.||||:|..::::|||..: .:.:.:|..:
Mouse    92 VELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGL-EILTDMSRPV 155

  Fly   147 DVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLEVDIKRYAKVEKIPGGAI 211
            .:.|:..:.:.....:.:|.:.::|.|...::::||..| :.......||::....|:|: ||.|
Mouse   156 QLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKV-IDPATATSVDLRDIKIVKKL-GGTI 218

  Fly   212 EESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQTNVEIIGEQDFTRMLQIEEEF 276
            ::..:::|:::.:.|.:..:.| :|..:|.|:...|...|.:....:.:.......|:|:.|..:
Mouse   219 DDCELVEGLVLTQKVANSGITR-VEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAY 282

  Fly   277 VQRICADIIAVKPDLVFTEKGV-----SDLAQHYLLKAGITAIRRLRKTDNLRIARACGATIVNR 336
            :..:...|.....:::..:|.:     ||||.|:|.|..|..::.:.:.|...|.:..|...|..
Mouse   283 ILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDVEREDIEFICKTIGTKPVAH 347

  Fly   337 TEELTEKDVGTGAGLFEVKKIGDEYFTFVTECKEP-KACTILLRGASKDILNETERNLQDALHVA 400
            .::.|...:|:.....||...|......:|.|..| |..||::||::|.::.|.||::.|||.|.
Mouse   348 IDQFTADMLGSAELAEEVSLNGSGKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVI 412

  Fly   401 RNLVLEPRLVAGGGAVEMAASQLLTR--KQVKGPYT----AVAHALEIIPRTLAQNCGANTIRAL 459
            |.||.:..|:|||||.|:..:..||.  :.:.|..:    |.|.|:|:||.|||:|.|.|.|..:
Mouse   413 RCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTV 477

  Fly   460 TALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVS 523
            |.||.:||    .|....||:...|.|.::..:.:.:||.|.:.....|.||...:|:|||:|:
Mouse   478 TELRNRHA----QGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_001189236.1 chap_CCT_gamma 7..528 CDD:274085 162/519 (31%)
TCP1_gamma 7..524 CDD:239453 162/519 (31%)
Cct4NP_033967.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 1/1 (100%)
TCP1_delta 25..538 CDD:239454 162/519 (31%)
Cpn60_TCP1 44..539 CDD:278544 156/502 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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