DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT3 and cct6a

DIOPT Version :10

Sequence 1:NP_650572.2 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_958447.1 Gene:cct6a / 116994 ZFINID:ZDB-GENE-011018-2 Length:531 Species:Danio rerio


Alignment Length:537 Identity:155/537 - (28%)
Similarity:279/537 - (51%) Gaps:42/537 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLSQNTKRESGR--KVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREIT 72
            |.:.|.|.|..|  .....||.|.:.:.||:::.|||:..:|||:...|.|.:|.|||.:|.|:.
Zfish     4 VKALNPKAEVARAHAALAVNISAARGLQDVLKSNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQ 68

  Fly    73 VQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVGH 137
            :|||.|..:.::|..||:..||||||.:::.||:|..|:.::.:.:||.||...: ||.:|    
Zfish    69 IQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYVSEGLHPRVIAEGF-EAAKD---- 128

  Fly   138 LQSQLSIQLDVK-----DKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLEVDI 197
              ..|::..:||     |:..:.:|.:..:.||...:.:||..:..:|||..:.....   .:|:
Zfish   129 --KALAVLEEVKVAKEMDRETLINVARTSLRTKVHTELADLLTEAVVDAVLAIRKPNE---PIDL 188

  Fly   198 KRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQTNVEIIG 262
             ...::.::......::.:::|::::....||.|::.||:..|:..:.||||:|.|..:......
Zfish   189 -YMVEIMEMKHKTDSDTQLIRGLVLDHGARHPDMKKRIEDAFILTCNVSLEYEKTEVNSGFFYKS 252

  Fly   263 EQDFTRMLQIEEEFVQ-----------RICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRR 316
            ..:..::::.|.:|::           ::|||  ..|..:|..:||:...:...|.|.||.|:||
Zfish   253 ADERDKLVKAERKFIEDRVMKIIDLKNKVCAD--NKKGFVVINQKGIDPFSLDALAKEGIVALRR 315

  Fly   317 LRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIGDEYFTFVTECKEPKACTILLRGA 381
            .::.:..|:..|||...:|..|:||.:.:| .|||.....:|:|.|||:..|..|::.|:|::|.
Zfish   316 AKRRNMERLTLACGGVAMNSVEDLTPECLG-HAGLVYEYTLGEEKFTFIENCSNPRSVTLLVKGP 379

  Fly   382 SKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLT--RKQVKG----PYTAVAHAL 440
            :|..|.:.:..::|.|...:|.:.:..:|||.||.|:|.:..|.  :.:|||    ...|.|.||
Zfish   380 NKHTLTQIKDAVRDGLRAVKNAIEDGSVVAGAGAFEVAVADALVKHKPKVKGRAQLGVQAFADAL 444

  Fly   441 EIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTY 505
            .:||:.||||.|.:....|..|:::. ...|..|   |:|..:||.:......:|:..:||.|..
Zfish   445 LVIPKVLAQNSGYDPQETLVKLQSEF-KEAGQLV---GVDLSTGEPMVAGEAGVWDNYSVKKQLL 505

  Fly   506 KTAVETAILLLRIDDIV 522
            .:....|..:|.:|:|:
Zfish   506 HSCTVIASNILLVDEIM 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT3NP_650572.2 chap_CCT_gamma 7..528 CDD:274085 155/537 (29%)
cct6aNP_958447.1 TCP1_zeta 7..526 CDD:239458 154/534 (29%)

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