DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6IP1 and RETREG2

DIOPT Version :10

Sequence 1:NP_650570.1 Gene:Arl6IP1 / 42027 FlyBaseID:FBgn0038453 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_077269.3 Gene:RETREG2 / 79137 HGNCID:28450 Length:543 Species:Homo sapiens


Alignment Length:185 Identity:31/185 - (16%)
Similarity:71/185 - (38%) Gaps:22/185 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LEPFRTAIVGAYGVLTWEKQYYAGVVFGVISCLYLVLWYLDLSLITLLSLLGVISILLNYAFPMV 83
            |..:...:..|..:|.|||..::.|....::.|:   |.|..|.:....||.| |:|..:...:.
Human    60 LRGWEAVLAAAQRLLVWEKPLHSLVTAAALNGLF---WLLSSSSLRPFFLLSV-SLLAYFLLDLW 120

  Fly    84 SRLIFGGVNWDGDQEAKFE----------------DVCGQVCAVKGSLVVWYEYL--FNERKSTV 130
            .......|:....:|...:                ::|..:.....:..:..:.|  :..:....
Human   121 QPRFLPDVSASSPEEPHSDSEGAGSGARPHLLSVPELCRYLAESWLTFQIHLQELLQYKRQNPAQ 185

  Fly   131 FVIVMSLGLLAMAWIGAIINNLLLMYLATLLILMWPGLQNKDIFKAITQRASKII 185
            |.:.:..|...:|.:|..:..:::.|:..|.||:||.:...::.:.:..|...::
Human   186 FCVRVCSGCAVLAVLGHYVPGIMISYIVLLSILLWPLVVYHELIQRMYTRLEPLL 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6IP1NP_650570.1 Arl6IP1_RETR3-like 30..194 CDD:425403 29/174 (17%)
RETREG2NP_077269.3 RETR2_RHD 51..249 CDD:411700 31/185 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 254..287
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..394
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..486
LIR motif. /evidence=ECO:0000305|PubMed:26040720 490..495
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 504..543
Blue background indicates that the domain is not in the aligned region.

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