DRSC/TRiP Functional Genomics Resources

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Protein Alignment nonA-l and pspc1

DIOPT Version :9

Sequence 1:NP_001262646.1 Gene:nonA-l / 42026 FlyBaseID:FBgn0015520 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001038723.1 Gene:pspc1 / 692285 ZFINID:ZDB-GENE-030131-9530 Length:512 Species:Danio rerio


Alignment Length:381 Identity:142/381 - (37%)
Similarity:224/381 - (58%) Gaps:19/381 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 THELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQ 311
            |.::.....|.:..|..|.||:||||.||..|:|.:::|..||:..::|.|.::.|.|:||:...
Zfish    58 TVDIKNFRRPGEKTFTQRCRLFVGNLPSDMADEDFKKLFFKYGDAKEVFINRDRGFGFIRLETRT 122

  Fly   312 NAEKAKRALDGSLRKGRVLRVRFAPN-AIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRG 375
            .||.||..|||::...|.:|:|||.: |.:.|.||:..||||||.|:|..|||:|||::.|||||
Zfish   123 LAEIAKAELDGTVLGNRPIRIRFATHGAALTVRNLSPVVSNELLEQAFSQFGPVERAIVIVDDRG 187

  Fly   376 KHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRH 440
            :.||:||||||.|.:|...|..|.:....||.|.||.::||.|..:|.||||:|.| :||.::..
Zfish   188 RPTGKGIVEFANKPAARKALDHCADGALLLTTSPRPVILEPTEQYDDEDGLPEKLL-QKSAQYHK 251

  Fly   441 ERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQ 505
            ||...|.||...:||.||.||||.|.::.|.:::.::|.::..::|||.:||.|:.|.:..::||
Zfish   252 EREHKPHFAQPGTFEFEYSSRWKALDEMDKQQREQVERNIQEAKEKLETEMEAAKQEHQLMMMRQ 316

  Fly   506 ELKKRELDNERMKLEWEMREKQAE---EIRKREEEYMHRYQNQLLRHEEDMRARQQENDL---LM 564
            :|.:|:.:..|::   |:|.::.:   :|..|.||...|.:..::||.|.:..|:|.:..   .|
Zfish   317 DLMRRQEELRRLE---ELRNQELQKRKQIELRHEEERRRREEDMIRHREQLDIRRQPDGFKSGFM 378

  Fly   565 QAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPG------GPDNS 614
            ::::.:|.:::....|..|.| :.| :|......|...:.|.|.|      |||.|
Zfish   379 ESREQDMRMNEMGTRGAINIG-DSF-NPVTAISGNQGPTQMMGMGGRVGAMGPDGS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonA-lNP_001262646.1 RRM1_p54nrb_like 264..334 CDD:240778 29/69 (42%)
RRM2_p54nrb_like 339..418 CDD:240779 41/78 (53%)
NOPS_NONA_like 409..508 CDD:240580 39/98 (40%)
OmpH <479..578 CDD:281871 26/104 (25%)
DUF4472 479..559 CDD:291409 23/82 (28%)
pspc1NP_001038723.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56
RRM1_PSP1 75..145 CDD:241030 29/69 (42%)
RRM2_PSP1 151..230 CDD:241033 41/78 (53%)
NOPS_PSPC1 221..314 CDD:240584 37/93 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 451..512
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I8758
eggNOG 1 0.900 - - E1_KOG0115
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 263 1.000 Inparanoid score I3072
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1274880at2759
OrthoFinder 1 1.000 - - FOG0001632
OrthoInspector 1 1.000 - - mtm6571
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23189
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4077
SonicParanoid 1 1.000 - - X1036
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.960

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