Sequence 1: | NP_001262646.1 | Gene: | nonA-l / 42026 | FlyBaseID: | FBgn0015520 | Length: | 630 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003749428.1 | Gene: | Rbm15 / 684233 | RGDID: | 1592713 | Length: | 962 | Species: | Rattus norvegicus |
Alignment Length: | 720 | Identity: | 134/720 - (18%) |
---|---|---|---|
Similarity: | 225/720 - (31%) | Gaps: | 252/720 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 SLNSSPLPQRQQRGNSTN----------------KNLGKPTPPKLNAASDGNPAEKKARLGGNTQ 57
Fly 58 NGGG-----VAGGGGTGGGGGG----GGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINE 113
Fly 114 SPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQ 178
Fly 179 EQSNGYPGNQGDNKG---------------------GQGQ-----------RGAGGGKHQRG--- 208
Fly 209 ---------------NRSRR-------SGGSGIMNSSM--------GGGGQRG----------ED 233
Fly 234 FFIAQRLLDISGPTHELPPIELP------TDNKFVGRNR-------------------------- 266
Fly 267 ---------LYVGNLTSDTTDDDLREMFKPYGEIGDI-FSNPEKNFT----FLRLDYYQNAEKAK 317
Fly 318 RALDGSLRKGRVLRVRF---APNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTG 379
Fly 380 EGIVEFAKKSSASAC---------------LRL--CNEKCFFLTASLRPCLVEPMEVNNDNDG-- 425
Fly 426 LPDKTLNKKS----LEFR-------------------HERSVGPRFACLNSFEHEYGSRWKQLHD 467
Fly 468 LFKSKQDSLKRE---LKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAE 529
Fly 530 EIRKR 534 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nonA-l | NP_001262646.1 | RRM1_p54nrb_like | 264..334 | CDD:240778 | 21/109 (19%) |
RRM2_p54nrb_like | 339..418 | CDD:240779 | 17/95 (18%) | ||
NOPS_NONA_like | 409..508 | CDD:240580 | 21/126 (17%) | ||
OmpH | <479..578 | CDD:281871 | 10/59 (17%) | ||
DUF4472 | 479..559 | CDD:291409 | 10/59 (17%) | ||
Rbm15 | XP_003749428.1 | RRM1_RBM15 | 168..250 | CDD:240997 | 8/81 (10%) |
RRM2_RBM15 | 366..452 | CDD:240999 | 19/85 (22%) | ||
RRM3_RBM15 | 455..527 | CDD:241001 | 15/76 (20%) | ||
SPOC | 789..925 | CDD:285043 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166347816 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |