DRSC/TRiP Functional Genomics Resources

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Protein Alignment nonA-l and RAVER2

DIOPT Version :10

Sequence 1:NP_536740.1 Gene:nonA-l / 42026 FlyBaseID:FBgn0015520 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001353094.1 Gene:RAVER2 / 55225 HGNCID:25577 Length:691 Species:Homo sapiens


Alignment Length:459 Identity:102/459 - (22%)
Similarity:174/459 - (37%) Gaps:114/459 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 GAGGGKHQRGNRSRRSGGSGIMNSSMG---GGGQRGEDFFIAQRLLDISGPT---HELPPIELPT 257
            |.|||:          ||:| :.|:.|   |.|.||:            ||:   ||..|..:|.
Human     6 GDGGGE----------GGAG-LGSAAGLGPGPGLRGQ------------GPSAEAHEGAPDPMPA 47

  Fly   258 --------------DNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLD 308
                          ..:...|.::.|.||..|:...::.::.|.| ::...:.:..|...|:.| 
Human    48 ALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDY-DLKYCYVDRNKRTAFVTL- 110

  Fly   309 YYQNAEKAKRAL----DGSLRKGRVLRVRFAP-NAIVRVTNLNQFVSNELLHQSFEIFGPIERAV 368
              .|.|:|:.|:    ..|.| |:.|.|:..| :|::.:||:....::|...:....:|.|||..
Human   111 --LNGEQAQNAIQMFHQYSFR-GKDLIVQLQPTDALLCITNVPISFTSEEFEELVRAYGNIERCF 172

  Fly   369 ICVDD-RGKHTGEGIVEFAKKS-SASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTL 431
            :...: .|...|.|.||:.||. :|.|.|.|...:   |.||  ....:.|:||.    |..:.:
Human   173 LVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQ---LGAS--ALFAQWMDVNL----LASELI 228

  Fly   432 NKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLE---AQMEY 493
            :.|.|             |::....:|... ::|..:|.|....:..:|..:|....   |.:||
Human   229 HSKCL-------------CIDKLPSDYRDS-EELLQIFSSVHKPVFCQLAQDEGSYVGGFAVVEY 279

  Fly   494 ARYEQETELLRQELKKRELDNERMKLEW-----EMREKQAEEIRKREEEYMHRYQNQLLRHEEDM 553
            :..||..| ::|......:...::::.:     ..|...|..|  ..:..||..|..||.....:
Human   280 STAEQAEE-VQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALI--AAQRVMHSNQKGLLPEPNPV 341

  Fly   554 RARQQENDLLMQAKKLNMILDQQ-------EGFGGSNSGFEHFDSP--------------FEVFG 597
            :..:..|:..|    |.::|..|       ....|:.....|..:|              ..|.|
Human   342 QIMKSLNNPAM----LQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLNKAHQSSVMG 402

  Fly   598 NNSN 601
            |.||
Human   403 NTSN 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonA-lNP_536740.1 PRK12678 3..>219 CDD:237171 6/19 (32%)
Med15 <90..>191 CDD:312941
RRM1_p54nrb_like 264..334 CDD:409769 19/73 (26%)
RRM2_p54nrb_like 339..418 CDD:409770 21/80 (26%)
NOPS_NONA_like 409..508 CDD:240580 20/101 (20%)
APG6_N <477..555 CDD:465452 17/85 (20%)
RAVER2NP_001353094.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47 18/63 (29%)
RRM1_RAVER2 70..139 CDD:410065 18/73 (25%)
RRM2_RAVER2 143..219 CDD:410067 21/80 (26%)
RRM3_RAVER2 229..326 CDD:410069 19/113 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 492..522
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 543..574
Blue background indicates that the domain is not in the aligned region.

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