DRSC/TRiP Functional Genomics Resources

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Protein Alignment nonA-l and RAVER2

DIOPT Version :9

Sequence 1:NP_001262646.1 Gene:nonA-l / 42026 FlyBaseID:FBgn0015520 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001353094.1 Gene:RAVER2 / 55225 HGNCID:25577 Length:691 Species:Homo sapiens


Alignment Length:459 Identity:102/459 - (22%)
Similarity:174/459 - (37%) Gaps:114/459 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 GAGGGKHQRGNRSRRSGGSGIMNSSMG---GGGQRGEDFFIAQRLLDISGPT---HELPPIELPT 257
            |.|||:          ||:| :.|:.|   |.|.||:            ||:   ||..|..:|.
Human     6 GDGGGE----------GGAG-LGSAAGLGPGPGLRGQ------------GPSAEAHEGAPDPMPA 47

  Fly   258 --------------DNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLD 308
                          ..:...|.::.|.||..|:...::.::.|.| ::...:.:..|...|:.| 
Human    48 ALHPEEVAARLQRMQRELSNRRKILVKNLPQDSNCQEVHDLLKDY-DLKYCYVDRNKRTAFVTL- 110

  Fly   309 YYQNAEKAKRAL----DGSLRKGRVLRVRFAP-NAIVRVTNLNQFVSNELLHQSFEIFGPIERAV 368
              .|.|:|:.|:    ..|.| |:.|.|:..| :|::.:||:....::|...:....:|.|||..
Human   111 --LNGEQAQNAIQMFHQYSFR-GKDLIVQLQPTDALLCITNVPISFTSEEFEELVRAYGNIERCF 172

  Fly   369 ICVDD-RGKHTGEGIVEFAKKS-SASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTL 431
            :...: .|...|.|.||:.||. :|.|.|.|...:   |.||  ....:.|:||.    |..:.:
Human   173 LVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQ---LGAS--ALFAQWMDVNL----LASELI 228

  Fly   432 NKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLE---AQMEY 493
            :.|.|             |::....:|... ::|..:|.|....:..:|..:|....   |.:||
Human   229 HSKCL-------------CIDKLPSDYRDS-EELLQIFSSVHKPVFCQLAQDEGSYVGGFAVVEY 279

  Fly   494 ARYEQETELLRQELKKRELDNERMKLEW-----EMREKQAEEIRKREEEYMHRYQNQLLRHEEDM 553
            :..||..| ::|......:...::::.:     ..|...|..|  ..:..||..|..||.....:
Human   280 STAEQAEE-VQQAADGMTIKGSKVQVSFCAPGAPGRSTLAALI--AAQRVMHSNQKGLLPEPNPV 341

  Fly   554 RARQQENDLLMQAKKLNMILDQQ-------EGFGGSNSGFEHFDSP--------------FEVFG 597
            :..:..|:..|    |.::|..|       ....|:.....|..:|              ..|.|
Human   342 QIMKSLNNPAM----LQVLLQPQLCGRAVKPAVLGTPHSLPHLMNPSISPAFLHLNKAHQSSVMG 402

  Fly   598 NNSN 601
            |.||
Human   403 NTSN 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonA-lNP_001262646.1 RRM1_p54nrb_like 264..334 CDD:240778 19/73 (26%)
RRM2_p54nrb_like 339..418 CDD:240779 21/80 (26%)
NOPS_NONA_like 409..508 CDD:240580 20/101 (20%)
OmpH <479..578 CDD:281871 22/113 (19%)
DUF4472 479..559 CDD:291409 17/87 (20%)
RAVER2NP_001353094.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47 18/63 (29%)
RRM1_RAVER2 70..139 CDD:241108 18/73 (25%)
RRM2_RAVER2 143..219 CDD:241110 21/80 (26%)
RRM3_RAVER2 229..326 CDD:241112 19/113 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 492..522
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 543..574
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154201
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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