DRSC/TRiP Functional Genomics Resources

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Protein Alignment nonA-l and sfpq

DIOPT Version :9

Sequence 1:NP_001262646.1 Gene:nonA-l / 42026 FlyBaseID:FBgn0015520 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_998443.1 Gene:sfpq / 406564 ZFINID:ZDB-GENE-040426-2452 Length:619 Species:Danio rerio


Alignment Length:655 Identity:200/655 - (30%)
Similarity:297/655 - (45%) Gaps:147/655 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 QNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQ---GFQVANNSHQKQINESPKPA 118
            :.|.|:..|.|.|.|.|.|...|...| ||:|:...||...|   ||:....:...|::...|| 
Zfish     4 RGGMGMGMGMGMGMGMGMGMGMGNPNF-RNQNQHHFQNRGPQMGGGFRQNQGNQGNQVSTQQKP- 66

  Fly   119 AGNVPAKNNEL----SAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQ-------- 171
              ..||:|..:    .|.|.||.|               :..|:||.       |.|        
Zfish    67 --QEPAQNKPVVQTPPAQGPGQAQ---------------QAANKGPT-------PQQTPTVAPPK 107

  Fly   172 -------------------PNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGS 217
                               |.||..:......|.||                 ||.|        
Zfish   108 IQSAPPKIQSPPPKIQSPPPAQNNAKTPEIASPQNQ-----------------QRKN-------- 147

  Fly   218 GIMNSSMGGG-------------------GQRGEDFFIAQRLLDISGPTHE--LPPIEL------ 255
             :...:||.|                   .|:.:.    |:......|.:|  ..|.||      
Zfish   148 -LPKPAMGNGQKPPAPLKQEQTPAPTPPPAQQQQQ----QQQQQKQTPANEQSSQPQELKATLSL 207

  Fly   256 ---PTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAK 317
               |.:..:..|.||::|||.:|.|:.:.|::|..|||..:||.|..|.|.|:||:....||.||
Zfish   208 LRKPGEKTYTQRCRLFIGNLPNDITEPEFRKLFAKYGEPSEIFINQGKGFGFIRLESRALAEVAK 272

  Fly   318 RALDGSLRKGRVLRVRFAP-NAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEG 381
            ..||.:..|||.||||||. :|.:.|.||:.|||||||.::|..||.:|||::.|||||:.||:|
Zfish   273 AELDDTPMKGRPLRVRFATHSAALSVRNLSPFVSNELLEEAFSQFGLVERAIVIVDDRGRSTGKG 337

  Fly   382 IVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGP 446
            ||||:.|.:|...:...::..|.||:|.||.:||.:|..:|.||||:| |.:|:..::.||...|
Zfish   338 IVEFSSKPAARKAMDRISDGVFLLTSSPRPIVVELLEQYDDEDGLPEK-LAQKNPSYQKEREQPP 401

  Fly   447 RFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKR- 510
            |||...:||:||..|||.|.::.|.::..:::.:....:|||.:|:.|.:|.:..:|||:|.:| 
Zfish   402 RFARPGTFEYEYSQRWKSLDEMEKQQRQQVEKNICEAREKLETEMDDAYHEHQANMLRQDLLRRQ 466

  Fly   511 -------ELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQEN---DLLMQ 565
                   ||.::.|:...||:.:|.||.|:||||.|.  |.::   ||.:|.:::|:   :..|.
Zfish   467 EELRRMEELHSQEMQKRKEMQLRQEEERRRREEEMMR--QREI---EEQLRRKREESYRMNNFMD 526

  Fly   566 AKKLNMILDQQEGFGGSNSGFEHFDSPFEVFG------NNSNNSTMAGPGGPD-NSDGNQHGHID 623
            .:...|.::...|.|.|:..|...:..|.:.|      ...:.||..|....: .:|..|.|  .
Zfish   527 NRDREMRMNTSGGMGLSDMSFGSPNQKFSLTGMSFDGHQGLSGSTQGGLASNEMRNDRFQQG--G 589

  Fly   624 SWGHR 628
            |.|.|
Zfish   590 SGGQR 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonA-lNP_001262646.1 RRM1_p54nrb_like 264..334 CDD:240778 33/69 (48%)
RRM2_p54nrb_like 339..418 CDD:240779 38/78 (49%)
NOPS_NONA_like 409..508 CDD:240580 37/98 (38%)
OmpH <479..578 CDD:281871 32/109 (29%)
DUF4472 479..559 CDD:291409 29/87 (33%)
sfpqNP_998443.1 RRM1_PSF 219..289 CDD:241031 33/69 (48%)
RRM2_p54nrb_like 295..374 CDD:240779 38/78 (49%)
eNOPS_SF 365..461 CDD:297912 36/96 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589406
Domainoid 1 1.000 77 1.000 Domainoid score I8758
eggNOG 1 0.900 - - E1_KOG0115
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 263 1.000 Inparanoid score I3072
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1274880at2759
OrthoFinder 1 1.000 - - FOG0001632
OrthoInspector 1 1.000 - - mtm6571
orthoMCL 1 0.900 - - OOG6_107408
Panther 1 1.100 - - O PTHR23189
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4077
SonicParanoid 1 1.000 - - X1036
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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