DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nonA-l and nono

DIOPT Version :9

Sequence 1:NP_001262646.1 Gene:nonA-l / 42026 FlyBaseID:FBgn0015520 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_991398.1 Gene:nono / 403096 XenbaseID:XB-GENE-1002494 Length:465 Species:Xenopus tropicalis


Alignment Length:482 Identity:165/482 - (34%)
Similarity:245/482 - (50%) Gaps:89/482 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 QGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNR 210
            |||:|.:.||.|..|.        .|.:|..:..|                        ||:...
 Frog     2 QGNRGYRMEQQNHAPR--------RQQHQQQHHHQ------------------------HQQAET 34

  Fly   211 SRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSD 275
            :..:.|.                    |......|.|.:|.....|.:..:..|:||:||||..|
 Frog    35 TSPTNGQ--------------------QATSPNEGVTIDLKNFRKPGEKTYTQRSRLFVGNLPMD 79

  Fly   276 TTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFA-PNAI 339
            .|::::|::|:.||:.|:||.:.:|.|.|:||:....||.||..||....:|:.|||||| .:|.
 Frog    80 VTEEEMRKLFEKYGKAGEIFIHKDKGFGFIRLETRTLAEIAKAELDNLPLRGKQLRVRFACHSAS 144

  Fly   340 VRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFF 404
            :.|.|:.||||||||.::|.|||.:||.|:.|||||:.||:||||||.|.||...|..|::..:.
 Frog   145 LSVKNIPQFVSNELLEEAFSIFGQVERTVVIVDDRGRSTGKGIVEFASKPSARKALDRCSDGAYL 209

  Fly   405 LTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLF 469
            ||:..||..||||:..:|.:|||:|.|.|..: .:.||...||||...|||:||..|||.|.::.
 Frog   210 LTSFPRPITVEPMDQLDDEEGLPEKLLVKNQM-CQREREQPPRFAQPGSFEYEYAMRWKALIEME 273

  Fly   470 KSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKR 534
            |.:|:.:.|.:|..::|:|.:||.||:|.:..|:||:|.:|:.:..||:      |..::|::||
 Frog   274 KQQQEQVDRNIKEAQEKMEIEMEAARHEHQVMLMRQDLMRRQEELRRME------ELHSQEVQKR 332

  Fly   535 EEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFD-------SP 592
            ::..        |||||:.|.|::|.    :.::..|:..|||||..|.......|       .|
 Frog   333 KQIE--------LRHEEERRRREEET----RRQQEEMLRRQQEGFKNSYPDAREADIRMAQMAMP 385

  Fly   593 FEVFGNN----------SNNSTMAGPG 609
            ..:..||          |..:..||||
 Frog   386 GAIGMNNRPSLANSNVASGAAANAGPG 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonA-lNP_001262646.1 RRM1_p54nrb_like 264..334 CDD:240778 31/69 (45%)
RRM2_p54nrb_like 339..418 CDD:240779 42/78 (54%)
NOPS_NONA_like 409..508 CDD:240580 42/98 (43%)
OmpH <479..578 CDD:281871 30/98 (31%)
DUF4472 479..559 CDD:291409 26/79 (33%)
nonoNP_991398.1 RRM1_p54nrb 68..138 CDD:241032 31/69 (45%)
RRM_SF 144..223 CDD:388407 42/78 (54%)
NOPS_p54nrb 214..307 CDD:240582 39/93 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I8956
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 275 1.000 Inparanoid score I2885
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1274880at2759
OrthoFinder 1 1.000 - - FOG0001632
OrthoInspector 1 1.000 - - mtm9442
Panther 1 1.100 - - O PTHR23189
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1036
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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