DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nonA-l and nito

DIOPT Version :9

Sequence 1:NP_001262646.1 Gene:nonA-l / 42026 FlyBaseID:FBgn0015520 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001286174.1 Gene:nito / 35756 FlyBaseID:FBgn0027548 Length:793 Species:Drosophila melanogaster


Alignment Length:135 Identity:38/135 - (28%)
Similarity:56/135 - (41%) Gaps:29/135 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 HELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDI-FSNPEKN----FTFLRL 307
            |.:.|.:.|...:     .|:.|||.....||:||.:|..||.:.|| ...|...    |.|:| 
  Fly   302 HHVQPEDDPLSTR-----TLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVR- 360

  Fly   308 DYYQNAEKAKRA---LDG--------SLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIF 361
              |||.:.|.||   |.|        .:..|:|     .|...:.:..|..:.|...|.:.|:.|
  Fly   361 --YQNLDMAHRAKIELSGQYIGKFQCKIGYGKV-----TPATRMWIGGLGAWTSVTQLEREFDRF 418

  Fly   362 GPIER 366
            |.|::
  Fly   419 GAIKK 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonA-lNP_001262646.1 RRM1_p54nrb_like 264..334 CDD:240778 27/85 (32%)
RRM2_p54nrb_like 339..418 CDD:240779 7/28 (25%)
NOPS_NONA_like 409..508 CDD:240580
OmpH <479..578 CDD:281871
DUF4472 479..559 CDD:291409
nitoNP_001286174.1 RRM <56..>223 CDD:223796
RRM1_Spen 98..175 CDD:240754
RRM2_Spen 312..390 CDD:240755 25/85 (29%)
RRM3_Spen 397..467 CDD:240756 7/27 (26%)
SPOC 630..789 CDD:311609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459920
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23189
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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