Protein Alignment nonA-l and pspc1

DIOPT Version :10

• Sequence 1: NP_536740.1
• Gene: nonA-l / 42026
• FlyBaseID: FBgn0015520
• Length: 630
• Species: Drosophila melanogaster
• Sequence 2: XP_002938004.2
• Gene: pspc1 / 100489975
• XenbaseID: XB-GENE-492866
• Length: 517
• Species: Xenopus tropicalis
• Alignment Length: 466
• Identity: 164/466 - (35%)
• Similarity: 252/466 - (54%)
• Gaps: 53/466 - (11%)

  Fly   173 NQNANQ---EQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRS-----GGSGIMNSSMGGGGQ 229
            |:|..|   |::||..|.......|:|              |:||     |...:|...|..|.:
 Frog     3 NRNLKQVHIEKNNGGGGEMLSPPSGKG--------------SKRSFEVAEGDPSLMPPKMEDGEE 53

  Fly   230 RGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDI 294
            .             .|.|.::.....|.:..:..|.||:||||.:|.|:::.:::|:.:||..::
 Frog    54 E-------------RGVTIDIKSFLKPGEKSYTQRCRLFVGNLPTDITEEEFKKLFEKFGEPSEV 105

  Fly   295 FSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPN-AIVRVTNLNQFVSNELLHQSF 358
            |.|.::.|.|:||:....||.||..|||.:.|.|.||:|||.: |.:.|.||...||||||.::|
 Frog   106 FINRDRGFGFIRLESRTLAEIAKAELDGMILKNRPLRIRFATHGAALTVKNLAPVVSNELLEEAF 170

  Fly   359 EIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDN 423
            .:|||:||||:.|||||:.||:|.||||.|.:|...|..|.|..|.||.:.||.:|||||..:|.
 Frog   171 SMFGPVERAVVIVDDRGRPTGKGFVEFAAKPAARKALERCTEGAFILTTTPRPVIVEPMEQFDDE 235

  Fly   424 DGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLE 488
            ||||:|.: :|:.::..||...||||...:||.||.||||.|.::.|.::|.:.|.::..::|||
 Frog   236 DGLPEKFM-QKTQQYLKEREEPPRFAQPGTFEFEYSSRWKALDEMEKQQRDQVDRNIREAKEKLE 299

  Fly   489 AQMEYARYEQETELLRQELKKR--------ELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQ 545
            |:||.||:|.:..|:||:|.:|        ||.|:.::...:.:.:..||.|:||||.|.:....
 Frog   300 AEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQFQMRHEEEQRRREEELMRQRDQD 364

  Fly   546 LLRHEEDMRAR---QQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNN-STMA 606
            .||.:|..:..   .:|.|:.|....:...::..:.:..:.:|.:   .|..:.|.|.|| :|:.
 Frog   365 DLRRQEGFKTNYMDTREQDMRMGDMGVRGAINMGDTYSPATAGTQ---GPPPMMGMNMNNRATVP 426

  Fly   607 GPG-GPDNSDG 616
            ||. ||..:.|
 Frog   427 GPTMGPSATMG 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nonA-l	NP_536740.1	PRK12678	3..>219	CDD:237171	13/53 (25%)
		Med15	<90..>191	CDD:312941	7/20 (35%)
		RRM1_p54nrb_like	264..334	CDD:409769	29/69 (42%)
		RRM2_p54nrb_like	339..418	CDD:409770	42/78 (54%)
		NOPS_NONA_like	409..508	CDD:240580	44/98 (45%)
		APG6_N	<477..555	CDD:465452	29/85 (34%)
pspc1	XP_002938004.2	RRM1_PSP1	75..145	CDD:409999	29/69 (42%)
		RRM2_PSP1	151..230	CDD:410002	42/78 (54%)
		NOPS_PSPC1	221..314	CDD:240584	41/93 (44%)