DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fas1 and Stab2

DIOPT Version :10

Sequence 1:NP_001097814.1 Gene:Fas1 / 42025 FlyBaseID:FBgn0285925 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_619614.1 Gene:Stab2 / 192188 MGIID:2178743 Length:2559 Species:Mus musculus


Alignment Length:841 Identity:155/841 - (18%)
Similarity:271/841 - (32%) Gaps:291/841 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DKLRDDSELS-QSTAKSLRRLMPVRFYSLLESNQIANSTLSLRS------CTIFVPTNEAFQRYK 82
            ||:....|.: |.|..::.:....:|.||||...:..   :|..      .|||||:|||.   .
Mouse   513 DKIEPTLESNPQQTIMTMLQPRYGKFRSLLEKTNVGQ---ALEKGGIDEPYTIFVPSNEAL---S 571

  Fly    83 SKTAHVL-----------------YHITTEAYTQKRLPNTVSS----DMAGNPPLYITKNSNGDI 126
            :.||.||                 |||.  |:||..:...||:    .|| |..:....:|.|.|
Mouse   572 NMTAGVLDYLLSPEGSRKLLELVRYHIV--AFTQLEVATLVSTLHIRSMA-NQIITFNISSKGQI 633

  Fly   127 FVNNARIIPSLSVETNSDGKRQIMHIIDEVLEPLTV---------------KAG---------HS 167
            ..||..:     .||....|...::.:..||.|.::               |.|         .|
Mouse   634 LANNVAV-----DETEVAAKNGRIYTLTGVLIPPSILPILPHRCNETKREMKLGTCVRCFMKNWS 693

  Fly   168 DTPNN--PNAL---KFLKNAEEFNVDNIGVRTYRSQVTM-------------------------- 201
            ..|.|  |.|:   |....:..:|: .||...| ..||:                          
Mouse   694 KCPTNSEPTAIFTNKCFYGSRAWNL-KIGCARY-CDVTVEIPRCCKGFFGPDCNPCPGGFMNPCS 756

  Fly   202 AKKESVYDAAGQHTFLVPVDEGFKLS--------------------ARSSLVDGKV-IDGHVIPN 245
            ...:.:....|..|.:  .::||:.|                    ....:.|.:: .||..:|.
Mouse   757 GNGQCIDGLGGNGTCI--CEDGFQGSRCQFCSKPNRYGPQCNRTCQCVHGICDNRLDSDGSCLPG 819

  Fly   246 TVIFTAAAQHDDPKASAAFEDL----LKVTVSFFKQK-----------NGKMYVKSNTIVGDAKH 295
            |.....|.:..|.:.||....:    :..|..:..:.           :|.:..|.:..:|....
Mouse   820 TCREGTAGRFCDKQTSACGPYMQFCHIHATCEYSNETASCVCNDGYEGDGTLCSKKDPCLGSTSR 884

  Fly   296 RVGVVLAEIVKAN--------------------------IPVSNG-------------------- 314
            ......||.::|:                          :|.|.|                    
Mouse   885 GGCSPNAECIQASTGTYSCVCQRGWTGNGRDCVEINSCLLPSSGGCHDNATCLYVGPGQNECECK 949

  Fly   315 ------------VVHLIHR-----PLMIIDTTVTQ----FLQENAENGALRKFYEVIMD------ 352
                        ::..:.:     ||.....|::.    ..||..|...:..:..|:|:      
Mouse   950 KGFRGNGIDCEPIISCLEQIEKCHPLATCQYTLSGVWSCVCQEGYEGNGVLCYGNVLMELSFLSE 1014

  Fly   353 --------NGGAVLDDINSLTEVTILAPSNEAWN--SSNINNVLRDRNKMRQILNMHIIKDRLNV 407
                    |..::...:::.:.:|:|.||.:|..  ..|..:....||.:..::..|.:.....|
Mouse  1015 AAVFYQWINNASLQSMLSATSNLTVLVPSLQAIKDMDQNEKSFWLSRNNIPALIKYHTLLGTYRV 1079

  Fly   408 DKIRQKNANLIAQVPTVNNNTFLYFNVRG-----EGSDTVITVEGGGVNATVIQADVAQTNGYVH 467
                       |.:.|:.::..|..:::|     :.:|..||:||    |:.:..|.|.|||.||
Mouse  1080 -----------ADLQTLPSSHMLATSLQGSFLRLDKADGNITIEG----ASFVDGDNAATNGVVH 1129

  Fly   468 IIDHVLGVPYTTVLGKLES-----DPMMSDTYKMGKFSHFN-DQLNNTQRRFTYFVPRDKGWQKT 526
            ||:.|| :|...:.|.|.|     :.|...:...|...|:| .........:|.|||.::..:..
Mouse  1130 IINKVL-IPQRGLTGSLPSLLTRLEQMPDYSIFRGYIIHYNLASAIEAADAYTVFVPNNEAIESY 1193

  Fly   527 ELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESG---------SVILPTFR 582
            ..:..:...|          :.||:.|:.:.:|      |::....:|         |.:|..|.
Mouse  1194 IREKKATSLK----------EDILQYHVVLGEK------LLRNDLHNGMHRETMLGFSYLLAFFL 1242

  Fly   583 DSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPL------LEEKDVVVAGG 637
            .:..:.|.|....|.             :|....|:||.::..|      .:..|.::..|
Mouse  1243 HNDQLYVNEAPINYT-------------NVATDKGVIHGLEKVLEIKKNRCDNNDTIIVRG 1290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas1NP_001097814.1 Fasciclin 49..159 CDD:396845 39/136 (29%)
FAS1 215..324 CDD:214719 24/207 (12%)
FAS1 368..476 CDD:214719 31/114 (27%)
Fasciclin 488..627 CDD:396845 26/154 (17%)
Stab2NP_619614.1 EGF_3 254..283 CDD:463759
EGF_3 334..369 CDD:463759
Fasciclin 390..512 CDD:396845
Fasciclin 533..661 CDD:396845 39/141 (28%)
EGF_3 844..872 CDD:463759 2/27 (7%)
EGF_3 881..916 CDD:463759 3/34 (9%)
EGF_3 927..959 CDD:463759 2/31 (6%)
EGF_3 965..1001 CDD:463759 6/35 (17%)
Fasciclin 1018..1137 CDD:396845 32/134 (24%)
Fasciclin 1156..1273 CDD:396845 24/145 (17%)
EGF_3 1482..1518 CDD:463759
EGF_3 1524..1560 CDD:463759
EGF_3 1566..1602 CDD:463759
Fasciclin 1628..1733 CDD:396845
Fasciclin 1758..1889 CDD:396845
Laminin_EGF 1978..2022 CDD:395007
EGF_3 2094..2129 CDD:463759
EGF_3 2135..2172 CDD:463759
Link_Domain 2206..2297 CDD:470631
FAS1 2363..2452 CDD:214719
Interaction with TMSB4X. /evidence=ECO:0000250 2510..2520
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2514..2559
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.