DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14893 and FAR7

DIOPT Version :9

Sequence 1:NP_650568.2 Gene:CG14893 / 42023 FlyBaseID:FBgn0038451 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_197634.1 Gene:FAR7 / 832303 AraportID:AT5G22420 Length:409 Species:Arabidopsis thaliana


Alignment Length:500 Identity:114/500 - (22%)
Similarity:197/500 - (39%) Gaps:163/500 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NGIQGFYKDKVVFLTGATGFLGKVIIEKLLR-TTEVKRIYAMMRPKRGKDIQERLAIWQKDPLFE 77
            |.:| |.:::.:.:|||:|||.||::|::|| ...|||:|.::|                     
plant     4 NCVQ-FLENRTILVTGASGFLAKVLVERILRLQPNVKRLYLLVR--------------------- 46

  Fly    78 VLLKAKPDALKRIFVIAGDCLDPDLGINRSDRKLLVSEVHIVIHGAATVRFNEPLHVALAINTRG 142
                                        .||:|            :|..|::    |||.|||.|
plant    47 ----------------------------ASDKK------------SAEQRYD----VALGINTFG 67

  Fly   143 TRLMLQLAKEMLQLEAYLHISTAFSNCVIFRIEEKFYPEHLT---------------CDANSVLA 192
            ...:|..||:.::.:..||:||      ::...|:  |.|:.               .|.|:...
plant    68 AINVLNFAKKCVKPKLLLHVST------VYVCGER--PGHIVEKHFAMGESLNGKNKVDINTERR 124

  Fly   193 MSELLSEQMMDK---------------LAPTLVGNFPNTYTYTKALAEDVVLREFGDLPLSIFRP 242
            :::..|:|..::               |....:..:||||.:|||:.|.::......:|:.|.||
plant   125 LADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYGWPNTYVFTKAMGEMLLGHYRETMPIVIIRP 189

  Fly   243 SVIIATHEEPVSGWIDNLYGPIAHIYGVSHGVLRLTTYDKDGYASLVPVDYCANAALASIWQTSK 307
            ::|.:|..:|..|||:.|....:.|.....|:|:....|:.....::|||...||.:|.......
plant   190 TIITSTFSDPFPGWIEGLKTVDSVIIFYGKGILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCH 254

  Fly   308 DKSQRNAISQPAIYTLAPSEKN--------LLLNTDFIKHSLIHRNDFPLTKMIWYPFVHNISNP 364
            |....      .:|.:..|.:|        .:::..|:|..|:.||.     |:..|.|..||. 
plant   255 DSGSH------TVYHVGSSNQNPVIYKQIYEMMSRYFMKSPLVGRNG-----MLIVPKVTRIST- 307

  Fly   365 RIFPLAAFFYHTLPGYFYDLALRLSG-----------------RK----PRLVKLYRSIHANIAV 408
                ||.|..:|  ...|.|.:::.|                 ||    .||||||:.       
plant   308 ----LARFRVYT--NLRYKLPIQILGLLSVISLSQRDKFALHNRKFKMAMRLVKLYKP------- 359

  Fly   409 LEHFMNNSWHFETKSTDRLRVMMSPED-RRLYNFDMETLDWKEYF 452
               ::.....|:.|:.:.||:....:| .:|:..:.:.:||::||
plant   360 ---YVLFKGIFDDKNMETLRIKNEAKDMEKLFGTNPKCIDWEDYF 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14893NP_650568.2 PLN02996 19..452 CDD:215538 110/493 (22%)
FAR-N_SDR_e 23..339 CDD:187547 77/354 (22%)
Sterile 375..465 CDD:281068 21/99 (21%)
FAR7NP_197634.1 PLN02996 1..402 CDD:215538 113/499 (23%)
FAR-N_SDR_e 12..289 CDD:187547 78/355 (22%)
Sterile 319..402 CDD:281068 20/92 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

Return to query results.
Submit another query.