DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14893 and FAR8

DIOPT Version :9

Sequence 1:NP_650568.2 Gene:CG14893 / 42023 FlyBaseID:FBgn0038451 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_190042.2 Gene:FAR8 / 823581 AraportID:AT3G44560 Length:496 Species:Arabidopsis thaliana


Alignment Length:515 Identity:140/515 - (27%)
Similarity:223/515 - (43%) Gaps:124/515 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FYKDKVVFLTGATGFLGKVIIEKLLRT-TEVKRIYAMMRPKRGKDIQERL--AIWQKDPLFEVLL 80
            |.::|.:.:|||||||.||.:||:||. ..|.::|.::|....:...:||  ..::|| ||:||.
plant     8 FLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFEKD-LFKVLR 71

  Fly    81 ------KAKPDALKRIFVIAGDCLDPDLGINRSD-RKLLVSEVHIVIHGAATVRFNEPLHVALAI 138
                  |......:::..:|||.....||:..|: |:.:..|:.||::.|||..|:|...:.|.|
plant    72 DNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAATTNFDERYDIGLGI 136

  Fly   139 NTRGTRLMLQLAKEMLQLEAYLHISTAFSNCVIFRI---------EEKFYPEHLTCDANSVLAMS 194
            ||.|...:|..||:.::.:..||:|||:       :         |:.|..|.: |:.|.:....
plant   137 NTFGALNVLNFAKKCVKAQLLLHVSTAY-------VCGEKPGLLPEKPFVMEEI-CNENGLQLDI 193

  Fly   195 ELLSEQMMDKLAP----------------------TLVGNFPNTYTYTKALAEDVVLREFGDLPL 237
            .|..|.|..:|..                      ..:..:||||.:||::.|.::.....:|||
plant   194 NLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKSMGEMLLGNHKENLPL 258

  Fly   238 SIFRPSVIIATHEEPVSGWIDNLYGPIAHIYGVSHGVLRLTTYDKDGYASLVPVDYCANAALAS- 301
            .|.||::|.:|..||..|||:.|....:.|.....|||:....|.:....::|.|..|||.:|: 
plant   259 VIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPADMVANAMIAAA 323

  Fly   302 -----------IWQTSKDKSQRNAISQPAIYTLAPSEKNLLLNTDFIKHSLIHRNDFPLTKMIWY 355
                       ::|..  .|.:|    |.||    .|...:|...|.|:||..||...:|     
plant   324 ATHAGGSKVHMVYQVG--SSHQN----PIIY----GEIREILFCYFTKNSLRSRNGSMIT----- 373

  Fly   356 PFVHNISNPRIFPLAAFF--YHTLPGYFYDLALRL------------------SGRK----PRLV 396
                 :|..::.|..|.|  |.|:.   |.|.::|                  ..||    .|||
plant   374 -----VSKMKLIPTLALFSLYMTIR---YKLPVQLLKLVDIIYPSREGDEYKNKNRKIDMVMRLV 430

  Fly   397 KLYRSIHANIAVLEHFMNNSWHFETKSTDRLRVMMSPEDRR-----LYNFDMETLDWKEY 451
            |||          |.::.....|:.::|..|......||.|     :::||.:.:.||:|
plant   431 KLY----------EPYVLFKGIFDDRNTKNLCAKQKEEDNRNSENFMFDFDPKIIKWKDY 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14893NP_650568.2 PLN02996 19..452 CDD:215538 140/515 (27%)
FAR-N_SDR_e 23..339 CDD:187547 104/368 (28%)
Sterile 375..465 CDD:281068 24/104 (23%)
FAR8NP_190042.2 PLN02996 1..495 CDD:215538 140/515 (27%)
FAR-N_SDR_e 12..362 CDD:187547 104/368 (28%)
Sterile 394..495 CDD:281068 23/97 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.970

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