DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14893 and Far1

DIOPT Version :9

Sequence 1:NP_650568.2 Gene:CG14893 / 42023 FlyBaseID:FBgn0038451 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001272760.1 Gene:Far1 / 67420 MGIID:1914670 Length:515 Species:Mus musculus


Alignment Length:499 Identity:171/499 - (34%)
Similarity:270/499 - (54%) Gaps:23/499 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IQGFYKDKVVFLTGATGFLGKVIIEKLLRT-TEVKRIYAMMRPKRGKDIQERLAIWQKDPLFEVL 79
            |..:|:.|.:.|||||||||||::|||||: ..|..:|.::|.|.|:..|||:.......||:.|
Mouse     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSKLFDRL 68

  Fly    80 LKAKPDALKRIFVIAGDCLDPDLGINRSDRKLLVSEVHIVIHGAATVRFNEPLHVALAINTRGTR 144
            ....||..::|..|..:...|.|.::..|:::::...:::.|.||||||||.|..|:.:|...||
Mouse    69 RDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATR 133

  Fly   145 LMLQLAKEMLQLEAYLHISTAFSNCVIFRIEEKFYPEHLTCDANSVLAMSELLSEQMMDKLAPTL 209
            .::.||::|..||.::|:|||::.|....|:|..||..:  |...::...|.:.:.:::.:.|.|
Mouse   134 QLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPV--DPKKLIDSLEWMDDGLVNDITPKL 196

  Fly   210 VGNFPNTYTYTKALAEDVVLREFGDLPLSIFRPSVIIATHEEPVSGWIDNLYGPIAHIYGVSHGV 274
            :|:.||||.|||||||.||.:|...|.::|.|||::.|:.:||..|||||..||.........|:
Mouse   197 IGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGI 261

  Fly   275 LRLTTYDKDGYASLVPVDYCANAALASIWQTSKDKSQRNAISQPAIYTLAPSEKNLL---LNTDF 336
            ||......:..|.|||||...|.:||:.|.:..:: .||.:    :|.......|..   ...|:
Mouse   262 LRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNR-PRNIM----VYNCTTGSTNPFHWGEVGDY 321

  Fly   337 IKHSLIHRNDFPLTKMIWYPFVHNISNPRIFPLAAFFYHTLPGYFYDLALRLSGRKPRLVKLYRS 401
            :.||....   ||.::..:|:|...||..:........||:|....||||||:|:||.::|....
Mouse   322 LNHSFKMN---PLNQVFRHPYVKFCSNNLMLHYWKGVKHTVPALLLDLALRLTGQKPWMMKTITR 383

  Fly   402 IHANIAVLEHFMNNSWHFETKSTDRLRVMMSPEDRRLYNFDMETLDWKEYFRKALFGMRLYLTKE 466
            :|..:..||:|.:|||.:.|.:.:.|...::|||::.:|.|:..|.|.||......|.:.|:..|
Mouse   384 LHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNE 448

  Fly   467 PPTQESLEQGRRLFYRLKILHYSFVTLLCVIAGFLLWTLVRLFI 510
              ....|...|:...:|:.:.|.|.|:|.:    |:|   |:||
Mouse   449 --EMSGLPAARKHLNKLRNIRYGFNTILVI----LIW---RIFI 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14893NP_650568.2 PLN02996 19..452 CDD:215538 154/436 (35%)
FAR-N_SDR_e 23..339 CDD:187547 115/319 (36%)
Sterile 375..465 CDD:281068 33/89 (37%)
Far1NP_001272760.1 FAR-N_SDR_e 11..330 CDD:187547 117/328 (36%)
Sterile 371..447 CDD:376978 24/75 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847911
Domainoid 1 1.000 96 1.000 Domainoid score I7295
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.750

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